| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1808 |
|---|
| Symbol | ldhA |
|---|
| ID | 5385995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2088214 |
|---|
| End bp | 2089206 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640864792 |
|---|
| Product | fermentative lactate dehydrogenase |
|---|
| Protein accession | YP_001400783 |
|---|
| Protein GI | 153947549 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAG CCGTTTACAG TACCAAGCAG TATGACCGTA AATACCTTGA GCTGGTCAAC
AAAGATTTTG GCTTTGAATT GGAGTTTTTC GATTTTCTGC TTACCCCCAA AACCGCCAAA
ATGGCTGAGG GCTGTCAGGC GGTATGTCTC TTCGTCAATG ATGATGGCTG CCGCGAAATA
TTAACTGAAC TGGCGGCTAT CGGCGTTAAA ATTCTGGCAT TGCGTTGTGC TGGCTTTAAT
AACGTGGATC TGGAAGCGGC CAAAGAGTTG GGTATACAAG TGGTCCGAGT GCCCGCATAT
TCACCTGAAG CTGTCGCGGA ACATACCGTT GGCATGATGC TGAGCCTTAA CCGACGTATT
CACCGTGCTT ATCAGCGAAC CCGTGATGCC AATTTCTCGC TGGAAGGCTT GATTGGTTTC
AATATGCATA ACCGCACTGC GGGGATTATC GGCACAGGTA AAATTGGTGT TGCCACCATG
CGTATCCTTA AAGGTTTTGG TATGCGCCTG CTGGCGTTTG ACCCTTATCC AAGTGAGCAA
GCTCTAGAGC TAGGTGCAGA ATATGTTGAT CTGAAGACCT TGTACGCCGA GTCTGATGTT
ATCTCACTGC ATTGCCCGAT GACGCCAGAA AACCATCATT TGCTCAATAA ACAGTCATTT
GATCAAATGA AAGATGGCGT GATGATCATT AATACCAGCC GTGGCGGTTT AATTGATTCA
ACGGCGGCGA TCGATGCGTT AAAACAACAG AAAATAGGCT CCCTCGGTAT GGACGTTTAT
GAAAATGAAC GTGATTTATT CTTTGAAGAT AAATCCAATG ACGTGATTCA GGATGATGTT
TTCCGCCGTT TGTCTTCTTG CCATAATGTG TTATTTACTG GGCATCAGGC GTTCCTAACC
GAGGAAGCAC TCACCAGTAT CTCTGTCACC ACCTTGCAGA ATATTGCTCA GTTGGATAAA
GGCGAACCCT GCCCAAATAT CATCACCCTC TGA
|
|---|
| Protein sequence | MKLAVYSTKQ YDRKYLELVN KDFGFELEFF DFLLTPKTAK MAEGCQAVCL FVNDDGCREI
LTELAAIGVK ILALRCAGFN NVDLEAAKEL GIQVVRVPAY SPEAVAEHTV GMMLSLNRRI
HRAYQRTRDA NFSLEGLIGF NMHNRTAGII GTGKIGVATM RILKGFGMRL LAFDPYPSEQ
ALELGAEYVD LKTLYAESDV ISLHCPMTPE NHHLLNKQSF DQMKDGVMII NTSRGGLIDS
TAAIDALKQQ KIGSLGMDVY ENERDLFFED KSNDVIQDDV FRRLSSCHNV LFTGHQAFLT
EEALTSISVT TLQNIAQLDK GEPCPNIITL
|
|---|
| |