| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1780 |
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| Symbol | sapF |
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| ID | 5385261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2057861 |
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| End bp | 2058676 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640864763 |
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| Product | peptide ABC transporter, ATP-binding protein SapF |
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| Protein accession | YP_001400755 |
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| Protein GI | 153949673 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGA CGTTGCTCGA AGTCCGTAAT CTGAGCAAAA CTTTCCGCTA TCGTACCGGG
CTGTTTCGCC GTCAACATGT TGAGGCGGTA AAATCGGTGA GTTTTACCTT ACGCGAAGGC
CAAACACTGG CGGTGATTGG TGAAAATGGT TCGGGCAAAT CCACGTTGGC AAAAATGTTG
TCGGGCATGA TTGAGCCCAC CGCGGGTGAA TTACTGATTG ATGATCATCA TCTCGCTTAT
GGTGACTATG CTTACCGTAG CCAACGTATT CGTATGATTT TTCAAGACCC AAGCACCTCA
CTGAATCCTC GCCAGCGCAT TGGCCAGTTG CTGGATGCCC CACTGAAACT GAATACAGAA
CTCGATGCTC CGGCACGTGA ACAGCGGATC TACCAAACAC TGCGTCAGGT AGGGTTATTA
CCCGATCACG CTAATTACTA TCCCCACATG TTAGCATCCG GCCAAAAACA GCGGGTGGCA
CTGGCACGGG CTCTGATTCT GCAACCCAAA GTGATTATCG CGGATGAAGC ATTGGCCGCA
TTAGATATGT CCATGCGCTC ACAAATTATT AATCTAATGC TGGAGTTGCA GGAAAAACAC
GGCATATCCT ACATTTATGT GACTCAACAC TTGGGGATGA TGAAACACAT CAGCGACCAG
GTAATTGTGA TGCATGAAGG CGAAGTTGTA GAGCGTGGGA GTACGGCGGA AGTCTTGGCA
GCCCCGCTGC ACGACCTGAC TAAGCGTTTG ATCTCCAGCC ATTTTGGTGA AGCATTGACT
GCGGATGCCT GGCGTCGAGA TACCAGCAAT TTTTAG
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| Protein sequence | MAETLLEVRN LSKTFRYRTG LFRRQHVEAV KSVSFTLREG QTLAVIGENG SGKSTLAKML
SGMIEPTAGE LLIDDHHLAY GDYAYRSQRI RMIFQDPSTS LNPRQRIGQL LDAPLKLNTE
LDAPAREQRI YQTLRQVGLL PDHANYYPHM LASGQKQRVA LARALILQPK VIIADEALAA
LDMSMRSQII NLMLELQEKH GISYIYVTQH LGMMKHISDQ VIVMHEGEVV ERGSTAEVLA
APLHDLTKRL ISSHFGEALT ADAWRRDTSN F
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