| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1702 |
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| Symbol | yfeD |
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| ID | 5388090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1973729 |
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| End bp | 1974622 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640864683 |
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| Product | chelated iron ABC transporter, permease protein YfeD |
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| Protein accession | YP_001400679 |
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| Protein GI | 153947167 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGC TGTTCAGTTT GATCAGTGAG CCATTCGCCT ACCCCTTTAT GCAGCGGGCA
ATTGTCGCGG CAATCGTCAC TGGTGTGGTC TGCGCGATAC TCTCTTGCTA CCTGGTACTC
AAAGGGTGGT CGCTAATGGG AGATGCTATT TCTCATGCTG TGCTGCCAGG GATTGTTCTG
GCTTTTTGGC TCGGTATCCC TCTGGTCATC GGCGCTTTTG TCTCAGGGAT ATTTTGTGCC
GTGGCAACTG GCTATTTAAA AGAAAACAGC CGGGTTAAAG AAGATACCGT CATGGGGATT
GTTTTTTCTG GCATGTTCGC GTTCGGCTTA GTGCTGTTCT CCCGTATAGA TACTGACCAG
CACCTCAGCC ACATTTTGTT CGGTAACATG CTGGGGATTT CGCTGACAGA ACTGAAACAG
ACCCTGTGGA TCGCAGGTTT CACGCTATTG GTGGTGTTAC TAAAGCGCAA AGACTTTATG
TTGTACTGTT TCGATCCAAA CCATGCGCGG GTTATCGGGC TACCCGTTAA GTTTCTGCAT
TACGGTTTAC TTTGCTTACT GGCATTGACT ATCGTCGCGT CATTGCAGGC AGTTGGCGTT
ATTCTCGTCA TCGCCATGTT GATAGCGCCG GGTATTATCG CCTTTATGAT TTGTCGTAGT
TTTGATCAAA TGCTGGTTGT CGCGACACTG GTTTCAGTGG TCGCCTGTGT TTTAGGTACA
TTAATCAGTT TTCATATTGA TGGTGCAACA GGCCCATGCA TCGTGATTAT TCAAGCTTTA
TTCTTTGTTG TCGCCCTCAT TTACAACCAT ATAAAACCGA TTAAAGACCG AAAAATGGCA
CCACTCACCA AGGCAGTAAA TCCAGAAAAT ACAGCCCCAA GTAACCTGCC ATAG
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| Protein sequence | MNMLFSLISE PFAYPFMQRA IVAAIVTGVV CAILSCYLVL KGWSLMGDAI SHAVLPGIVL
AFWLGIPLVI GAFVSGIFCA VATGYLKENS RVKEDTVMGI VFSGMFAFGL VLFSRIDTDQ
HLSHILFGNM LGISLTELKQ TLWIAGFTLL VVLLKRKDFM LYCFDPNHAR VIGLPVKFLH
YGLLCLLALT IVASLQAVGV ILVIAMLIAP GIIAFMICRS FDQMLVVATL VSVVACVLGT
LISFHIDGAT GPCIVIIQAL FFVVALIYNH IKPIKDRKMA PLTKAVNPEN TAPSNLP
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