Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1671 |
Symbol | proQ |
ID | 5387374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1941191 |
End bp | 1941904 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640864652 |
Product | putative solute/DNA competence effector |
Protein accession | YP_001400648 |
Protein GI | 153949113 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000000024891 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATC AACCTAAGTT GAACAGTAGC AAAGAAGTCA TAGCCTTTTT GGCCGAGCGG TTCCCGCTTT GTTTCACCGC CGAAGGCGAA GCACGCCCTC TTAAGATCGG TATTTTTCAG GATCTGGTAG AACGTGTTCA GGGGGAAGAG AATTTAAGCA AAACGCAATT GCGTTCTGCG CTGCGTCTCT ACACCTCAAG CTGGCGTTAT CTTTATGGGG TCAAAGTCGG TGCTGAGCGT GTTGATTTGG ATGGCAACCC TTGTGGTGTG CTGGAAGAAC AACATGTAGA ACATGCCCGC AAACAGCTGG AAGAAGCGAA AGCCCGTGTT CAGGCACAAC GAGCTGAACA ACAGGCTAAA AAGCGCGAAG CTGCCATTGC TGCGGGTGAA ACGCCAGAGC CACGTCGCCC ACGTCCGGCA GGTAAAAAAC CTGCACCGCG TCGTGAAGCG GGTGCGGCTC CGGAAAACCG CAAGCCTCGT CAGTCACCTC GCCCGCAACA GGTTCGGCCA CCTCGTCCAC AGGTTGAGGA AAACCAGCCA CGTCCTGTGC CGGTCACAGA TATCTCTAAA CTGCAAATTG GTCAAGAAAT CAAAGTCAGA GCAGGCAAGA GTGCAATGGA TGCAACCGTA TTGGAAATCG CTAAAGATGG CGTACGGGTG CAGCTATCTT CCGGTCTGGC GATGATTGTG CGCGCAGAAC ACTTGCAGTT CTGA
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Protein sequence | MENQPKLNSS KEVIAFLAER FPLCFTAEGE ARPLKIGIFQ DLVERVQGEE NLSKTQLRSA LRLYTSSWRY LYGVKVGAER VDLDGNPCGV LEEQHVEHAR KQLEEAKARV QAQRAEQQAK KREAAIAAGE TPEPRRPRPA GKKPAPRREA GAAPENRKPR QSPRPQQVRP PRPQVEENQP RPVPVTDISK LQIGQEIKVR AGKSAMDATV LEIAKDGVRV QLSSGLAMIV RAEHLQF
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