Gene YpsIP31758_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1671 
SymbolproQ 
ID5387374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1941191 
End bp1941904 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content53% 
IMG OID640864652 
Productputative solute/DNA competence effector 
Protein accessionYP_001400648 
Protein GI153949113 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000024891 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATC AACCTAAGTT GAACAGTAGC AAAGAAGTCA TAGCCTTTTT GGCCGAGCGG 
TTCCCGCTTT GTTTCACCGC CGAAGGCGAA GCACGCCCTC TTAAGATCGG TATTTTTCAG
GATCTGGTAG AACGTGTTCA GGGGGAAGAG AATTTAAGCA AAACGCAATT GCGTTCTGCG
CTGCGTCTCT ACACCTCAAG CTGGCGTTAT CTTTATGGGG TCAAAGTCGG TGCTGAGCGT
GTTGATTTGG ATGGCAACCC TTGTGGTGTG CTGGAAGAAC AACATGTAGA ACATGCCCGC
AAACAGCTGG AAGAAGCGAA AGCCCGTGTT CAGGCACAAC GAGCTGAACA ACAGGCTAAA
AAGCGCGAAG CTGCCATTGC TGCGGGTGAA ACGCCAGAGC CACGTCGCCC ACGTCCGGCA
GGTAAAAAAC CTGCACCGCG TCGTGAAGCG GGTGCGGCTC CGGAAAACCG CAAGCCTCGT
CAGTCACCTC GCCCGCAACA GGTTCGGCCA CCTCGTCCAC AGGTTGAGGA AAACCAGCCA
CGTCCTGTGC CGGTCACAGA TATCTCTAAA CTGCAAATTG GTCAAGAAAT CAAAGTCAGA
GCAGGCAAGA GTGCAATGGA TGCAACCGTA TTGGAAATCG CTAAAGATGG CGTACGGGTG
CAGCTATCTT CCGGTCTGGC GATGATTGTG CGCGCAGAAC ACTTGCAGTT CTGA
 
Protein sequence
MENQPKLNSS KEVIAFLAER FPLCFTAEGE ARPLKIGIFQ DLVERVQGEE NLSKTQLRSA 
LRLYTSSWRY LYGVKVGAER VDLDGNPCGV LEEQHVEHAR KQLEEAKARV QAQRAEQQAK
KREAAIAAGE TPEPRRPRPA GKKPAPRREA GAAPENRKPR QSPRPQQVRP PRPQVEENQP
RPVPVTDISK LQIGQEIKVR AGKSAMDATV LEIAKDGVRV QLSSGLAMIV RAEHLQF