| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1640 |
|---|
| Symbol | |
|---|
| ID | 5387794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1906884 |
|---|
| End bp | 1909748 |
|---|
| Gene Length | 2865 bp |
|---|
| Protein Length | 954 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640864621 |
|---|
| Product | putative integral membrane protein |
|---|
| Protein accession | YP_001400617 |
|---|
| Protein GI | 153950864 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5373] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTATT GGCTGTTAAT TTTTTTACTT ATCTTCTTGT TTGTCATCTA TATGCAAATA
AGTGCGTTAT CCAACTCGGT AAAATATATA CGAGAAGAGA TAGGCAGGCT GCGCAATGAG
CTTGCTCCAC GCTTGCCTGA ACCTACCGTG GCCACTGTTG AGGAAGAGAA CACGCCAACG
CATTTGGCAG ATGAAGTGGC CGTGTCCAAG GTATGGACCC CTGATTACGC AACCTATCAG
AATTATCTAC TCACCAAAAA GCAAAGCCAG ATTAAAGAGA AGGCTCTTGC CGATTCAGTA
AAAAAAGAAC CCGCCCGGCC AATAGAATAT AGGATTGCTG ACCGTCTGGT GGTGCTTAAG
CCACAGGATG AGGCCCCTCA AGAATCGCCG AAAATGGATG CAGGCCCTGC CAGTGGTCAT
CCACAGAAAC CAGACGTGTG GACAAAATTG GAAAATGTCC TGTTTTCCTT AAAATCACCG
GAGAGTTTCT GGAAACGCCT CGAGCAAGAG TTTGCCGCAC GTTGGATGGT GTGGATCGGC
GGTGTGATCA TGGCACTGGG TGTGATTTTC CTGCTGAAAG CAGGCAGCGA ACAGGGTCTG
TTCGGGCCAA CCTTGCGGAT TGGTACCGCC ATTGTGCTGA GTGTGCTGAT GGTTGTTGGG
GGGGAGTGGC TCAGGCGTTC ACGTTTTCAG TTGCCCTTGG TCAATGCCGG TTATATCCCG
GCGGCGCTGA GTGGGGCCGG TATTCTCGGT CTGTTTGCCT CAATGCTGGC GGCTAAATAT
CTCTACGACA TGTTCCCGAT GCCCGTTCTC ATGCTATTGC TCAGCCTGAT TTCTCTGTTG
GCGATGGTGC TGGCATTGTG GCAGGGGCCA TTTATGGCGG CCTTGGGGCT GCTTGGCGCC
TATACCGTCC CGTTATTTGT TTCGACGGGC AGCGGTAATG TCACCGGGCT GTTGGCCTAC
CTGTTCCTGG TTAGTTTGGC GTCTATCGGC CTGATGAGCC GTGTCTATCG GCACTGGCTA
TGGCTGGGGG CGATGGTCGG AAACTATCTA TGGCTTTTGG TTTCTTTATT CATAGCAACG
TCCGAACACC AGTTAGCGCG TTCACTATTC CTGCTAGCAA CCACATACGG CTTCCTAGCC
TGGCCACATC TGGGGTGGGC GCTAAAAAGC AAAATACGTT TTCGCCATAA TGACTGGAAA
AACTGGCCCC CGGCTTTGCT GGATCCGTTA TTAACTGGGT TGATTGCCGG GCTTTCGCTA
TTAGCCTTAA CGTTAAGCGC AAATCATTCG ATCCTGGTCT GGAGCACGTT GGTATTCTCC
TGTATTAGCC TGTTACTGAT TGCCAGACGC TCACCTTCAT TGGATTTATT TGTTCCACTG
GCCGCGATAT TAGCCATTTC TCCCTTTATT AATGCAGGAA CGCTGTTTGA GCCAGAAACC
GTCTGGACGA GTCTGCTTGC GCTCAGCACA TTAGCGCTAT TCTGCGGGAT ATATGGTAGC
TACCAGGTCA CCCGGCCGGT TTACCGCAAG CTGTGGTGGG CGTTATTGTC GGTGCTGGTG
CCAATGTATC TCGTTGTAAG TACCTATTAT GCCTGTCGCG ATAATTTTGA GCTGGCTCCA
GTTAAATACA CACTGCTGGC GGTTTGTCTG GCTATGTATA TCGCGTGGAA TGCATTCAGT
GATGGGTATC GCCGTGGCTC AGCGCTGTTG CGGACGATCT ATCAGGTCGC CGCCCAACTG
ACGTTGACCT TTGCATTATT TATGGCTTTC AGCCAGGTTA CGCTAACCCT GCTGCTCGCG
GGTCAGCTTT TAGTTTTGGT ACTCTGGCAA CGTTGGCGAC AGGTTTCGTT ACTGTCTTGG
ATTTTGAAAC TGCATGCGAT CATACTGCTG GTTCGCCTGT CAATGAACCC GTATATCCTT
GGATATTCCT CGCCGTTGCA CATTGGTTCG GTCGTTATTC CTTGGACGCT ATACGGTTTT
GGGATTCCGA TTCTCTGCCT GTGGCTGAGT TCACGCTGGT TACCTGCGCG TCGCGGTGAG
CAGACCGCCA ATTGGTTAGC GGCCAATGCT ATTTATCTGT TGGCCTTGTG GATCAACGTT
GAATTACGTC ACCTGCTGCA TGGCAGCTAT CATCTGTCGC TGGATTTCGC TTCTCTTACC
GATTGTGCGT TGCATGGGGT GACCTTCGGG CTGATGGCGC TGGCCTACGG CTATCGTGAA
CAGTTTGCAG ATTCGCTACA ACGGATATAC CGCCTGGCGG CTAAAACCAG TGCCATTCTG
ATGCTCACCC TAACGTTGCT CTGCCTGGTT GTCTTTAACC CCATCTGGTC AGCACAACAG
GTTGGCGGCC TACCGCTGCT GAATATGGTG ACCGTTGCCT ATGCGATCCC GATGGTGTTC
ATGGTGGTAG CACTAAGATA CTGGCCAGAT CACTGGCTAG ATATCCGTCT GAAGCCCTAC
GTTATCGGTG CGATTGCGCT ACTGGGAATG GTGTTCATTA CCTTGACGGT CCGCCAGCTC
TGGCATGGTG ACCGGTTGGA TAATGATATC GTGTACAGCG GCGAACAATA CTCTTACTCC
TTAGCGTGGA TGTTAACTGC CATTGGCATG ATGTACAGCG CAATACACTG GCCTAACTAT
AAAGTGCGCC GCGCCTCCCT GGGGTTGTTG GCGCTCACGA TCGTCAAACT GTTCCTGTGG
GATATGTCTG GTCTTGAAGG GCTATATCGT TCGGTCTCAT TCCTCGGTCT GGGGCTGTGT
CTGGTAGCGA TTGGTTGGTT CTACCAGAAG TTTGTCGTTA TGAAGGAAGT CATTGAGCAA
AACAAGGATC AGCCGACAGC GGACGTGGTA CAAAGCGGGC AATAA
|
|---|
| Protein sequence | MEYWLLIFLL IFLFVIYMQI SALSNSVKYI REEIGRLRNE LAPRLPEPTV ATVEEENTPT
HLADEVAVSK VWTPDYATYQ NYLLTKKQSQ IKEKALADSV KKEPARPIEY RIADRLVVLK
PQDEAPQESP KMDAGPASGH PQKPDVWTKL ENVLFSLKSP ESFWKRLEQE FAARWMVWIG
GVIMALGVIF LLKAGSEQGL FGPTLRIGTA IVLSVLMVVG GEWLRRSRFQ LPLVNAGYIP
AALSGAGILG LFASMLAAKY LYDMFPMPVL MLLLSLISLL AMVLALWQGP FMAALGLLGA
YTVPLFVSTG SGNVTGLLAY LFLVSLASIG LMSRVYRHWL WLGAMVGNYL WLLVSLFIAT
SEHQLARSLF LLATTYGFLA WPHLGWALKS KIRFRHNDWK NWPPALLDPL LTGLIAGLSL
LALTLSANHS ILVWSTLVFS CISLLLIARR SPSLDLFVPL AAILAISPFI NAGTLFEPET
VWTSLLALST LALFCGIYGS YQVTRPVYRK LWWALLSVLV PMYLVVSTYY ACRDNFELAP
VKYTLLAVCL AMYIAWNAFS DGYRRGSALL RTIYQVAAQL TLTFALFMAF SQVTLTLLLA
GQLLVLVLWQ RWRQVSLLSW ILKLHAIILL VRLSMNPYIL GYSSPLHIGS VVIPWTLYGF
GIPILCLWLS SRWLPARRGE QTANWLAANA IYLLALWINV ELRHLLHGSY HLSLDFASLT
DCALHGVTFG LMALAYGYRE QFADSLQRIY RLAAKTSAIL MLTLTLLCLV VFNPIWSAQQ
VGGLPLLNMV TVAYAIPMVF MVVALRYWPD HWLDIRLKPY VIGAIALLGM VFITLTVRQL
WHGDRLDNDI VYSGEQYSYS LAWMLTAIGM MYSAIHWPNY KVRRASLGLL ALTIVKLFLW
DMSGLEGLYR SVSFLGLGLC LVAIGWFYQK FVVMKEVIEQ NKDQPTADVV QSGQ
|
|---|
| |