Gene YpsIP31758_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1637 
SymbolmotB 
ID5388041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1902139 
End bp1903440 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content49% 
IMG OID640864618 
Productflagellar motor protein MotB 
Protein accessionYP_001400614 
Protein GI153950639 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATC AGAACCACCC CGTTATTCTG GTCAAAAAGC GCAAAACTAA GCATGGTGCT 
GCGCATTACG GTGGGTCATG GAAAATCGCT TACGCTGACT TTATGACAGC AATGATGGCC
TTTTTTCTGG TGATGTGGTT GCTGGCTGTT TCTAGCCCGC AAGAACTGAC GCAAATTGCC
GAATATTTTC GGACACCACT AAAAGTCGCC TTAACCAGCG GTGATAAAAG CAGTTCCAGT
ACTAGCCCTA TTCCCGGTGG TGGTGATGAT CCTACTCAAC AAGTGGGTGA AGTGAGAAAG
CAGATTAATT CCGAAGAAAG CAGGCAAGAG ATACACCGGC TCAATAAATT GCGGGAAAAA
CTGGATCAAT TGATTGAGTC TGACCCCCGG TTGAAGGCAT TACGTCCCCA TTTGCTGATT
AACATGATGG ATGAGGGCTT GAGGATCCAG ATTATTGATA GCCAAAATCG GCCAATGTTC
AAGATGGGGA GCGCGCAAGT AGAACCGTAT ATGCGTGATA TTTTACGTGC TATTGCGCCG
ATCCTGAATG ACATACCGAA TAAACTCAGT TTATCCGGTC ACACCGATGA TCTACCGTAT
GCCCGCGGTG AAAGAGGTTA CAGCAACTGG GAGTTATCGG CTGATCGCGC CAATGCCTCG
CGGCGTGAAT TACTGGCTGG TGGTTTGGAT GAAGGCAAAA TTCTGCGTGT AGTCGGTATG
GCGTCAACCA TGCGGTTGAA AGAGCAGGCA TCAGATGATC CGGTTAACCG CCGTATCAGT
ATTTTAGTGC TGAATAAGCA GTCTCAACAC GATATTGAGC ACGAGAATTT AGACAACAGA
GCGCTGGATA TAGAAAAAGC AACCGGCTTA AAGCAGATTG ATACTCACGG GACGGTGCCT
GTAGCGGCAG TAACACCATC ATCGGCGGCA ATACCCTCAC CGGCGGTAAT ACCATCATCG
GTGACAACAC AATCAGCTAC GACAATACGA TCAGCTACGA CAATACAAGC CACTGCGACA
ACACAAGCAG TTACGACAAC ACGATCAGCT ACGACAACAC AAGCATCGGC CGTAGCACTG
TCGTCAGCAG GAGTACTGCC ATCAGATGTC ACATTGCCAG GCACGGTAGC ACTGCCAGCG
GCTGAACCGG TGAACACGCA GCCGCAGCCG ATGAGTACAA CTGAAACACA ACAATCGAGT
ACAGGGAATA TTACTTCAAC TGCCAATGGG CCAACGACAT CGTTACCCGC AGCACCTGCA
AGCAATATAC CGGTCTCTCC GACAAGCCGC GACGCACAGT AG
 
Protein sequence
MKHQNHPVIL VKKRKTKHGA AHYGGSWKIA YADFMTAMMA FFLVMWLLAV SSPQELTQIA 
EYFRTPLKVA LTSGDKSSSS TSPIPGGGDD PTQQVGEVRK QINSEESRQE IHRLNKLREK
LDQLIESDPR LKALRPHLLI NMMDEGLRIQ IIDSQNRPMF KMGSAQVEPY MRDILRAIAP
ILNDIPNKLS LSGHTDDLPY ARGERGYSNW ELSADRANAS RRELLAGGLD EGKILRVVGM
ASTMRLKEQA SDDPVNRRIS ILVLNKQSQH DIEHENLDNR ALDIEKATGL KQIDTHGTVP
VAAVTPSSAA IPSPAVIPSS VTTQSATTIR SATTIQATAT TQAVTTTRSA TTTQASAVAL
SSAGVLPSDV TLPGTVALPA AEPVNTQPQP MSTTETQQSS TGNITSTANG PTTSLPAAPA
SNIPVSPTSR DAQ