| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1614 |
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| Symbol | rluE |
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| ID | 5387051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1873164 |
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| End bp | 1873790 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640864595 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_001400591 |
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| Protein GI | 153947226 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAT TCTCTGTTAA AAATCACAAA GTTAACCGAT TCAGCACTAA GGCACAAGCC
AGGCAGTCCC CCCCCGCTGC GCCACGGCGG GTATTGTTAT TCAATAAACC TTTTGATGTA
TTACCGCAAT TCACTGATGA GTCTGGACGC ACCACTTTGC AGGGTTTCAT CCCTTTTAAG
GACGTTTATG CTGCTGGCCG GTTAGATCGC GATAGCGAGG GCTTATTGGT ATTAACCAAT
GATGGCAAGT TGCAAGCCAG GCTCACGCAA CCGGCGCAAA AAACAGGTAA AGTCTATTTT
GTACAAGTAG AAGGGGTCCC TGACAACGAT GCGCTCACAC AGCTAAAACG AGGCGTAACG
TTGAAAGATG GCCTGACGTT ACCCGCAGGC GCGGAGTTAG TGGCAGAGCC TGAATGGCTA
TGGCCGCGCC ATCCCCCTAT CAGAGAGCGT AAAACCATCC CAACCAGTTG GTTGAAAATA
ACACTTTATG AAGGCCGCAA CCGGCAAGTA CGTAGAATAA CCGCACATGT TGGCTTCCCT
ACCCTGCGCC TGATTCGTTT TAGTATAGGA AATTTAAGCC TTGGCAACTT ACAGCCCGGC
GAATGGAAGG AGATAACTGA TGTTTAA
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| Protein sequence | MNKFSVKNHK VNRFSTKAQA RQSPPAAPRR VLLFNKPFDV LPQFTDESGR TTLQGFIPFK
DVYAAGRLDR DSEGLLVLTN DGKLQARLTQ PAQKTGKVYF VQVEGVPDND ALTQLKRGVT
LKDGLTLPAG AELVAEPEWL WPRHPPIRER KTIPTSWLKI TLYEGRNRQV RRITAHVGFP
TLRLIRFSIG NLSLGNLQPG EWKEITDV
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