Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1612 |
Symbol | mnmA |
ID | 5387631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1871423 |
End bp | 1872538 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864593 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_001400589 |
Protein GI | 153950153 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATA ATAGCCAGAA AAAAGTCATC GTCGGCATGT CCGGCGGTGT CGACTCTTCC GTTTCCGCTT ACCTGCTCCA GCAACAGGGC TATCAAGTTG CTGGCCTGTT CATGAAGAAT TGGGAAGAGG ATGATGACGA GGAATATTGC TCTGCAGCGA CCGATCTGGC CGATGCGCAA GCAGTATGTG ACAAACTGGG TATGGAGTTG CACACCGTTA ATTTTGCAGC AGAATACTGG GATAACGTTT TCGAATTGTT CCTGGCAGAA TATAAAGCCG GGCGGACACC TAATCCCGAT ATTCTGTGTA ATAAAGAGAT AAAATTTAAA GCGTTTCTTG AATTTGCAGC TGAAGATTTG GGCGCAGATT ATATCGCCAC AGGTCATTAC GTCCGTCGCC AGGATGTTGA TGGTAAAAGC CGCCTACTGC GCGGCCTTGA TGGAAATAAA GACCAAAGCT ACTTCCTGTA TACATTAAGT CACGAACAGA TTGCTCAAAG TTTGTTCCCT GTCGGTGAGT TAGAAAAACC TGAAGTGCGT CGCATAGCAG AACAGCTCGA TTTAGTCACC GCAAAGAAAA AAGACTCTAC GGGCATCTGC TTTATCGGGG AGCGCAAATT CCGTGATTTC CTTGGCCGCT ACCTGCCTGC ACAGCCAGGT CCGATCATGA CGGTTGACGG CCAACTGGTG GGCAAACACC AAGGGTTGAT GTATCACACC CTCGGGCAAC GCAAAGGTTT AGGTATCGGG GGTACCAAAG AGGGGGGTGA TGACCCGTGG TACGTCGTGG ATAAAGACCT GGACAGCAAC ACGTTACTGG TTGCTCAGGG GCACGAACAC CCTCGGTTAA TGTCTGTTGG CCTGGTTGCT CAACAGCTAC ATTGGGTCGA TCGCCAACCC GTGACCGCCC CTTTCCGCTG TGTCGTAAAA ACACGTTATC GTCAGCAAGA TATTCCCTGT ACCGTAACAC CACTTGATGA CGAACGGGTT GACGTTCGGT TTGATGACCC GGTTGCTGCC GTCACGCCTG GCCAGTCTGC CGTCTTTTAC CAAGGTGAAA TCTGCCTGGG GGGCGGTATT ATTGAACAGC GTTACCCACT GACTATTCCG GCATAA
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Protein sequence | MSDNSQKKVI VGMSGGVDSS VSAYLLQQQG YQVAGLFMKN WEEDDDEEYC SAATDLADAQ AVCDKLGMEL HTVNFAAEYW DNVFELFLAE YKAGRTPNPD ILCNKEIKFK AFLEFAAEDL GADYIATGHY VRRQDVDGKS RLLRGLDGNK DQSYFLYTLS HEQIAQSLFP VGELEKPEVR RIAEQLDLVT AKKKDSTGIC FIGERKFRDF LGRYLPAQPG PIMTVDGQLV GKHQGLMYHT LGQRKGLGIG GTKEGGDDPW YVVDKDLDSN TLLVAQGHEH PRLMSVGLVA QQLHWVDRQP VTAPFRCVVK TRYRQQDIPC TVTPLDDERV DVRFDDPVAA VTPGQSAVFY QGEICLGGGI IEQRYPLTIP A
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