Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1592 |
Symbol | nagZ |
ID | 5385802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1848362 |
End bp | 1849393 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640864573 |
Product | beta-hexosaminidase |
Protein accession | YP_001400569 |
Protein GI | 153948161 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.541862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTCCCG TGATGTTAGA TGTTGCCAGC TATGAGCTGG ATGCTGAAGA GCGTGAGATT TTAAAACACC CACTGGTGGG AGGGTTGATC TTATTCAGCC GTAATTTTCA TGATGCGGAG CAGTTACGCG AATTAGTACG CCAAATCCGT GCAGCATCGC ATGAACGTTT GGTGGTCGCA GTGGATCAGG AAGGGGGGCG GGTCCAACGC TTTCGTGACG GTTTTACCCG CCTGCCAGCG GCTCAGTCTT TCGCGGCTAT CAATGATGCC GCTACTGCGG CTCAACTGGC GCAAGAGGCG GGGTGGTTGA TGGCAGCAGA AATGATGGCG ATGGATATTG ATATCAGTTT TGCTCCAGTA CTGGATATTG GCCATGTCAG CGCCGCAATT GGTGAGCGTT CATTCCACAG TGATCCACAA CAGGCGCGGA TAATGGCGGA GTGTTTCATC CGTGGGATGC ACAGTGCAGG GATGAAAACC ACGGGCAAGC ATTTTCCAGG GCACGGCGCA GTAACCGCAG ATTCACATAA AGAGACGCCA CATGATAATC GGCCACTGGC AGAAATCCGT ACTCATGATA TGGTTATATT TCGTGAATTG ATCCAGCGGA AATTACTGGA TGCGATTATG CCTGCTCACG TGATTTATAC CGAAGCCGAT GCACGGCCTG CCAGCGGTTC TGCCTATTGG TTACAAGAGA TATTGCGCCA AGAGCTAGGG TTCGAGGGCA TCATTTTCTC TGATGATCTC TCGATGGAAG GGGCTGCGAT CATGGGCAGT TACGCCGAGC GCGGCCAGGC ATCGTTGGAT GCCGGTTGCG ATATGATTTT GGTGTGTAAT AACCGTCAGG GGGCCGTGAG TGTGCTGGAT AATCTGTCTC CGATCAAAGC CGACCAACTG ACCCGTTTGT ACCATTCAGG GCAATTTGAC CGCCAGACAT TGATGGCTTC ATCCCGTTGG CAACAGGCGA ATAAAGCATT AACGGCACTC AGCGAACGTT GGGATGCACA TAAACAAACG TTGGGGCAAT AG
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Protein sequence | MGPVMLDVAS YELDAEEREI LKHPLVGGLI LFSRNFHDAE QLRELVRQIR AASHERLVVA VDQEGGRVQR FRDGFTRLPA AQSFAAINDA ATAAQLAQEA GWLMAAEMMA MDIDISFAPV LDIGHVSAAI GERSFHSDPQ QARIMAECFI RGMHSAGMKT TGKHFPGHGA VTADSHKETP HDNRPLAEIR THDMVIFREL IQRKLLDAIM PAHVIYTEAD ARPASGSAYW LQEILRQELG FEGIIFSDDL SMEGAAIMGS YAERGQASLD AGCDMILVCN NRQGAVSVLD NLSPIKADQL TRLYHSGQFD RQTLMASSRW QQANKALTAL SERWDAHKQT LGQ
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