| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1580 |
|---|
| Symbol | fabF |
|---|
| ID | 5384804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1836915 |
|---|
| End bp | 1838156 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640864561 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
|---|
| Protein accession | YP_001400557 |
|---|
| Protein GI | 153949107 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 5.10668e-17 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTAAGC GTCGAGTTGT TGTGACTGGA CTGGGCATGT TGTCTCCTGT CGGTAATACA
GTCGAATCCA CATGGAAAGC TGTTCTTGCC GGGCAGAGTG GCATCAGCCT GATCGACCAT
TTCGATACTA GTGCCTATGC AACGCGATTT GCTGGCTTAG TAAAAGATTT TAATTGTGAA
GATTACATTT CGCGTAAAGA TGCACGCAAA ATGGATGCAT TCATTCAGTA CGGTGTTGCT
GCTGGCATGC AAGCCATGCA AGACGCCGGG CTTGAAATTA CAGAAGCCAA CGCTTCCCGT
ATTGGTGCCG CTATCGGTTC CGGTATTGGC GGGCTGGGTC TGATTGAAGA AAACCACACC
GCATTGGTGA ACGGTGGGCC ACGTAAAATT AGCCCATTCT TTGTGCCTTC AACCATTGTG
AACATGATTG CTGGTCATCT GACTATCATG TATGGCCTGC GTGGACCAAG CATATCTATT
GCTACCGCTT GTACTTCTGG CGTACATAAT ATCGGTCACG CGGCACGTAT CATTGCTTAT
AATGATGCTG ATGTCATGGT GGCAGGGGGT GCTGAAAAAG CCAGTACACC ACTAGGTGTC
GGCGGTTTTG GTGCAGCTCG CGCATTGTCT ACCCGTAACG ATAACCCACA AGCAGCAAGT
CGCCCGTGGG ATAAAGACCG TGATGGTTTC GTTTTGGGTG ATGGTGCAGG CATGATGGTG
CTGGAAGAGT ACGAACACGC GAAGAAGCGT GGTGCAAAAA TCTATGCTGA AGTTGTTGGT
TTTGGTATGA GCAGCGATGC CTACCATATG ACCTCTCCGC CGGAAGACGG TTCAGGAGCC
GCTTTGGCCA TGGTGAATGC ATTACGTGAT GCTGGCATCA CAACCTCGCA AATTGGTTAT
ATTAATGCCC ACGGCACATC AACTCCTGCT GGCGATAAAG CCGAAACGCA GGCCGTTAAG
TCTGTATTTG GTGAAGATGC CTATAAAGTT ATGGTCAGTT CCACCAAATC CATGACTGGG
CACTTATTGG GTGCAGCTGG TGCCGTAGAG TCTATCTTTA CTGTGTTGGC GCTGCGTGAT
CAGGCTATTC CTGCAACGAT CAACCTGGAT AACCCAGATG AAGGTTGCGA TTTGGATTAT
GTTCCGCATG ATGCGCGTCA AGTAAAAGAT ATGGAATACA CCCTGTGTAA TTCCTTTGGT
TTCGGTGGCA CTAACGGCTC TTTGGTATTC CGTAAGGTAT AA
|
|---|
| Protein sequence | MSKRRVVVTG LGMLSPVGNT VESTWKAVLA GQSGISLIDH FDTSAYATRF AGLVKDFNCE
DYISRKDARK MDAFIQYGVA AGMQAMQDAG LEITEANASR IGAAIGSGIG GLGLIEENHT
ALVNGGPRKI SPFFVPSTIV NMIAGHLTIM YGLRGPSISI ATACTSGVHN IGHAARIIAY
NDADVMVAGG AEKASTPLGV GGFGAARALS TRNDNPQAAS RPWDKDRDGF VLGDGAGMMV
LEEYEHAKKR GAKIYAEVVG FGMSSDAYHM TSPPEDGSGA ALAMVNALRD AGITTSQIGY
INAHGTSTPA GDKAETQAVK SVFGEDAYKV MVSSTKSMTG HLLGAAGAVE SIFTVLALRD
QAIPATINLD NPDEGCDLDY VPHDARQVKD MEYTLCNSFG FGGTNGSLVF RKV
|
|---|
| |