Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1573 |
Symbol | |
ID | 5385607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1831986 |
End bp | 1832510 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640864554 |
Product | hypothetical protein |
Protein accession | YP_001400550 |
Protein GI | 153947132 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000000000825555 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGG TAAAATTACC CCTGACCATT GATGCGGTCC GTACCGCTCA GAAACGTTTA GATTACGCAG GTATCTATTC GCCTGAGCAG GTTACACGAG TGGCCGACTC TGTGGTAAGT GTGGACAGCG ATGTCGTGGC CTCATTATCG TTTAATATTG ATAATCAGCG TCTGGCGGTT ATTACAGGTC ATGCAGACGT CGATGTAACA TTGATGTGTC AGCGCTGTAA TGGCACGTTT GCACACCATG TTCATACAAC GTATTGTTTC AGCCCGATCG TCAATGATGA GCAGGCTGAA GCATTACCGG AAGCGTACGA GCCGATCGAA GTCGATGAAT TTGGCGAAGT CGATCTGCTG GCTATGATTG AAGACGAAAT TATTCTTTCA CTGCCTGTCG TTCCGGTACA TGATTCTGAA CACTGTGAAG TGTCCGAGGC GGACATGGTA TTTGGTAAAC TGCCTGCAGA GGTAGAGAAA CCCAATCCAT TTGCCGTATT AGCCAGTTTA AAGAAAAGTA ATTAA
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Protein sequence | MQKVKLPLTI DAVRTAQKRL DYAGIYSPEQ VTRVADSVVS VDSDVVASLS FNIDNQRLAV ITGHADVDVT LMCQRCNGTF AHHVHTTYCF SPIVNDEQAE ALPEAYEPIE VDEFGEVDLL AMIEDEIILS LPVVPVHDSE HCEVSEADMV FGKLPAEVEK PNPFAVLASL KKSN
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