Gene YpsIP31758_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1537 
Symbol 
ID5387721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1792973 
End bp1794319 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content48% 
IMG OID640864519 
ProductCRISPR-associated protein, Csy1 family 
Protein accessionYP_001400515 
Protein GI153948607 
COG category 
COG ID 
TIGRFAM ID[TIGR02564] CRISPR-associated protein, Csy1 family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGA AGGGATTAAC GGCGTTTATT GTCTCTTATA TCAAAAGCCG CGAGCAGCCA 
AAGCTTGAGG CTTTTGATAA AGAGGCAGAG AAAAGGCTGG CAGGGCTAAC TCAGGCGGAA
GATATTGCAC TGGCCCAGCA AGAGATTGCC CAACAACGGC GGGAGTTGAT AGCCCGTTAT
GAGGTGCGCA ATTGGTTAAC CGATGCGGCT AACCGTGCCG GGCAAATCAG TTTGGTGACC
CATGCATTGA AGTTCACACA CAGTGATGCC AAAGGCAGCA GTGTGTTTAA CCTGCCAGCG
GCAGAAAATG ATGCTATTTA TCTCTCTAGT GCCACCTTAG GTCAACCGGC TGTAGATGCC
GTCGGCAATG CCGCCGCACT GGATGTCGCA AAGCTGCTAC AAACCGAACA TAACGGCGAT
TCATTACTGG CTTGCCTTAA CCGGGCAGAT AACTCGCCAT TAGCTGCGTT GGCAGAGAAC
CCGCAACAAC TGGCATTATG GGTTGAAGGG TTCAAACAGG CGCTGGTGGA TAAACAGCTC
ACGTCACATA AACTGGCCAA GCAATTTTAT TTCCCGGTGG GACCAGATCA ATACCACTTG
TTAAGCCCAC TTTTCTCTTC ATCATTGGCG CAGGCCATGC ATCAACGTAT TGCCGAAGCC
CGTTTCAGTG ACCAATCGAA AGAGGCCAAG GTTGCCCATA AAGCAGGGAA ATGGCACTCA
GAGGCTAGGG TGATTTACCT CAAAACTGCG GTGCAAAATA TTGGCGGTAC CAAGCCCCAA
AATATCTCTT ACCTAAACAG CGTCCGTGGT GGAAAAGTTT GGTTGCTGCC CTGTGGCGCT
CCGCCTTGGA AAAATATTCA GAAACCGCCA ATAAAATATA GATCTATTTT TCATGATCGC
AGTGAATTTA CTGTACTGGC CCGCAATAAC CTGTGGCAAA TGCAGCAATA TTTGCTGGGT
GTCAAACCCC TGAGCAATAC GATGGACATC CGCGCTGTTC GTTTGGCCTG CAGCGATGAA
ATCATTGATA TTCTGTTTAA CTATGTGGCT GAAATCCAAA ATCTGGACGG TACCAATGGC
TGGAGTGACG CTGAAGATTG TAAGTTAAAA CGCTCAGAGC AGCTTTGGCT TGACCCGAAC
CGTGCTATGG ATGACCCCGT ATTTAAGCTC GAACGTGAAA AAGAGGATTG GAAACAAGAG
GTTAGACAAG ACTTCGGTTA CTGGTTAAAT CGTTGGTTAC AGCATGATGA ACTGGTCTTT
GGCTATGTTG AACAGCGGGA GTGGTCAAGC TTATTTAAGC AGCGGCTACG TGAATTTGAA
CAAGGTAGCC TGGAGACATG GTCATGA
 
Protein sequence
MEEKGLTAFI VSYIKSREQP KLEAFDKEAE KRLAGLTQAE DIALAQQEIA QQRRELIARY 
EVRNWLTDAA NRAGQISLVT HALKFTHSDA KGSSVFNLPA AENDAIYLSS ATLGQPAVDA
VGNAAALDVA KLLQTEHNGD SLLACLNRAD NSPLAALAEN PQQLALWVEG FKQALVDKQL
TSHKLAKQFY FPVGPDQYHL LSPLFSSSLA QAMHQRIAEA RFSDQSKEAK VAHKAGKWHS
EARVIYLKTA VQNIGGTKPQ NISYLNSVRG GKVWLLPCGA PPWKNIQKPP IKYRSIFHDR
SEFTVLARNN LWQMQQYLLG VKPLSNTMDI RAVRLACSDE IIDILFNYVA EIQNLDGTNG
WSDAEDCKLK RSEQLWLDPN RAMDDPVFKL EREKEDWKQE VRQDFGYWLN RWLQHDELVF
GYVEQREWSS LFKQRLREFE QGSLETWS