Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1506 |
Symbol | |
ID | 5387785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1746825 |
End bp | 1748051 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640864488 |
Product | oxidoreductase, zinc-binding dehydrogenase family protein |
Protein accession | YP_001400484 |
Protein GI | 153948997 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0000397792 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACTCA ATGTTTACGT TGTCATTTCA ATATTTATTA TGAATGCGAT GTCATTGTTG AGCGTTGAAG TGAGTAATTT TACTTTTGTT GGTTTGTTCA AAAATGACAA CGTCAACATT GCATCCATAC ACCGAGTTCT GTTGCTATTG GAGGAGTTAA TGAGTCAGTT ACCTGAGAAA ATGAGCGCTG TCGTATGTCA CGGCCCGCAG GATTATCGTT TAGAACACGT GCCGACACCT GTGCCGAAAG CCAAAGAGTT GGTGATCAAA GTGAAAGGCT GTGGGATTTG TGCGGGTGAC TGTAAATGTA AGAATGGGGC AAAAATGTTT TGGGGAGAAA CCCCGTGGGT AAAACCACCA GTGGTACCGG GACATGAATT CTACGGCCAT ATTGTGGCGC TGGGGGAAGG GACCGAATCG AAGTATAAGA TCGGCGAACG TGTGATTGCG GAACAAATAG TCCCTTGCTG GGACTGTCGC TATTGCAACT CTGGCAGCTA CTGGATGTGT GAAACGCACA ATATCTATGG CTTCCAAAAA GATGTCGCAG AAGGTGGCAT GGCGGAATAT ATGCGTTTTT CTGAAAATGC CATTGTTCAC AAAATCCCAG AGAGCCTGAG TCATGAAGAT GCGGTCCTGA TCGAACCCAT GGCCTGTGCG ATTCATACTG TGGCAAGAGG GGATATTCAA CTGGATGATG TGGTCGTACT GGCGGGCGCG GGGCCGCTGG GGCTGTGCAT GGTACAGGTT GCCCGCCTGA AGACACCGAA GAAATTGATT GTCATTGATA CTATTGAAGA ACGTTTGGCA CTGGCAAAAG CCTTTGGGGC TGATGTGGTA ATCAACCCAT TGAAAGAAGA TGCTGACAAA ATAGTGAAAT CTTTGACCGG TGGCTATGGC TGTGACGTTT ACATTGAAGC GACGGGTGCG CCCATCGGTG TGACTCAAGG CTTACAAATG ATCCGCAAGC TGGGGCGTTT TGTGGAGTTC AGTGTCTTTG GTCAGGAAAC TACCGTTGAT TGGTCCATTA TCGGCGACCG TAAAGAACTG GATATTCGCG GTGCTCACCT GGCACCTTAC AGTTATGAAA TTGCCACCGA TCTCTTTGAA CGTGGTCTGG TTACCTCAAA AGGTATCGTC ACCCACAGTT ATTCATTAGA TGATTGGGAA AAGGCTTTTG AGCTAGCGGA CTCCACGAAT TCTATTAAGG TCATTCTGGT TCCTTAA
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Protein sequence | MILNVYVVIS IFIMNAMSLL SVEVSNFTFV GLFKNDNVNI ASIHRVLLLL EELMSQLPEK MSAVVCHGPQ DYRLEHVPTP VPKAKELVIK VKGCGICAGD CKCKNGAKMF WGETPWVKPP VVPGHEFYGH IVALGEGTES KYKIGERVIA EQIVPCWDCR YCNSGSYWMC ETHNIYGFQK DVAEGGMAEY MRFSENAIVH KIPESLSHED AVLIEPMACA IHTVARGDIQ LDDVVVLAGA GPLGLCMVQV ARLKTPKKLI VIDTIEERLA LAKAFGADVV INPLKEDADK IVKSLTGGYG CDVYIEATGA PIGVTQGLQM IRKLGRFVEF SVFGQETTVD WSIIGDRKEL DIRGAHLAPY SYEIATDLFE RGLVTSKGIV THSYSLDDWE KAFELADSTN SIKVILVP
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