Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1470 |
Symbol | idnO |
ID | 5386121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1711430 |
End bp | 1712194 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640864452 |
Product | gluconate 5-dehydrogenase |
Protein accession | YP_001400448 |
Protein GI | 153946945 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAATC TATTTTCGTT GGAAAGTCGC AAAGTATTAA TTACTGGCTC CGCACAGGGT ATTGGATTCT TACTGGCAAA AGGGTTAGCT GAATTTGGCG CAGAGATTAT CATTAACGAT ATCACCGCAG AGCGTGCTGA AAAAGCCGTG GCTGAATTAC GTGCTAGCGG CTTTATCGCC CATGCCGCCG CATTTAACGT GACGAACCAT GATGAAGTCA ATGAAGCTAT CGAGAAAATA GAAAGCCATA TTGGTGCTAT CGACGTGTTA ATTAATAATG CAGGTATCCA ACGCCGCCAT GCCTTTACCG AATTCCCAGA AAAAGATTGG GATGATGTGA TTGCTGTTAA TCAAAAATCG GTATTTTTAG TTTCACAAGC CGTTGCCCGT TATATGGTTA AACGCCAACG TGGAAAAATT ATTAATATCT GTTCAATGCA AAGTGAATTA GGCCGCGATA CGATCACCCC ATATGCCGCC TCTAAAGGGG CAGTTAAAAT GCTGACCCGT GGGATGTGTG TCGAACTGGC TCGCTACAAT ATTCAGGTTA ACGGTATTGC GCCGGGTTAT TTCAAAACGG ATATGACAAA AGCACTGGTC GATGATCAAG CCTTTACCGA TTGGTTATGT AAACGCACAC CTGCCGCCCG TTGGGGAGAT CCAGAAGAGC TTATTGGTGC AGCGGTTTAT TTGTCATCCA AAGCCTCTGA CTTTGTTAAT GGTCATTTGC TGTTTGTTGA TGGTGGCATG CTGGTAGCCG TTTAA
|
Protein sequence | MKNLFSLESR KVLITGSAQG IGFLLAKGLA EFGAEIIIND ITAERAEKAV AELRASGFIA HAAAFNVTNH DEVNEAIEKI ESHIGAIDVL INNAGIQRRH AFTEFPEKDW DDVIAVNQKS VFLVSQAVAR YMVKRQRGKI INICSMQSEL GRDTITPYAA SKGAVKMLTR GMCVELARYN IQVNGIAPGY FKTDMTKALV DDQAFTDWLC KRTPAARWGD PEELIGAAVY LSSKASDFVN GHLLFVDGGM LVAV
|
| |