Gene YpsIP31758_1456 details

Gene Information

• Locus tag: YpsIP31758_1456
• Symbol: nuoCD
• ID: 5387257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1694685
• End bp: 1696481
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640864439
• Product: bifunctional NADH:ubiquinone oxidoreductase subunit C/D
• Protein accession: YP_001400435
• Protein GI: 153949467
• COG category: [C] Energy production and conversion
• COG ID: [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7; [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
• TIGRFAM ID: [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C; [TIGR01962] NADH dehydrogenase I, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATT TAACGACGTC CGACAGCTTA CAGCCTGCAT GGCAAACCCG TGATCATCTT 
GATGATCCGG TGATTGGTGA ATTGTCGAAC CGTTTTGGGC CTGAGGCCTT TGTTGTGCAA 
GCAACCCGTA CCGGTATGCC CGTGGTATGG GTGAAGCGTG AACAACTGCT GGAAGTAATG 
TCGTTTCTGA GAAAACAACC AAAGCCTTAT GTCATGCTGT TCGATCTGCA TGGCGTGGAT 
GAACGTCTAC GTACCCACCG CCAGGGCCTC CCTGATGCGG ACTTTTCTGT TTTCTATCAT 
CTGCTTTCCA TTGAACGTAA CCGCGACATT ATGCTGAAAG TGGCACTGTC TGAAAAAGAC 
TTACATGTGT CCACAGCAAC CAAAATTTTT CCCAATGCCA ACTGGTATGA GCGGGAAACA 
TGGGAGATGT TCGGTATTAC CTTTGATGGT CACCCGCATC TGACGCGTAT CATGATGCCG 
CAGAGTTGGG AAGGTCATCC GCTGCGTAAA GATTACCCCG CCCGGGCGAC CGAGTTCGAT 
CCCTATGTGC TGACGAAGCA GAAAGAAGAT CTGGAAATGG AATCCCTGAC CTTTAAGCCA 
GAAGATTGGG GCATGAAACG CGGGACTGAA AACGAGGACT TCATGTTCCT TAACCTCGGC 
CCAAACCACC CCTCTTCACA CGGTGCTTTC CGTATCGTGT TGCAGCTTGA TGGTGAAGAA 
ATTATCGACT GCGTACCGGA TGTGGGTTAC CACCACCGTG GTGCGGAGAA GATGGGCGAG 
CGCCAGTCCT GGCACAGCTA CATTCCGTAC ACCGACCGTA TCGAATACTT GGGCGGTTGT 
GTAAACGAAA TGCCTTACGT GTTGGCAGTT GAAAAACTGG CGGGCATCGT GGTGCCCGAT 
CGCGTGAACA CCATCCGGGT TATGCTGTCA GAATTATTCC GAATCAACAG TCACTTACTG 
TATATCAGTA CCTTTATTCA AGACGTCGGT GCCATGACGC CCGTGTTCTT TGCCTTTACT 
GACCGTCAGA AAGTGTACGA CGTGATCGAG GCGATTACAG GGTTCCGTAT GCACCCGGCC 
TGGTTCCGCA TTGGTGGTGT GGCGCACGAC CTGCCACGCG GCTGGGAACG TTTGCTACGC 
GACTTCCTTG ACTGGATGCC AAAACGTCTG GATTCCTACG TTAAAGCCGC TTTGCAGAAC 
AGCATCCTGA AAGGGCGCTC CGTTGGTGTG GCCGCGTATA ATGCGAAAGA GGCGTTAGAG 
TGGGGCGTCA CCGGTGCGGG CTTGCGTGCT ACCGGGGTTG AATTTGACGT GCGCAAATGG 
CGTCCGTATT CCGGTTATGA GAACTTCGAT TTTGAAGTAC CTGTCGGTAA CAACGGCGAT 
TGCTATGACC GCGTGATGCT GAAAGTGGAA GAGTTACGTC AAAGCCTGCG TATTCTGGAG 
CAATGTTATA AAAACATGCC AGAAGGGCCA TTCAAGGCTG ATCATCCCCT GACGACACCA 
CCACCGAAAG AGCGCACGCT TCAACATATC GAAACGCTAA TCACTCACTT CCTGCAAGTG 
TCATGGGGGC CAGTGATGCC AGCGAACGAA TCTTTCCAGA TGATTGAAGC AACCAAAGGG 
ATTAACAGCT ATTACCTGAC CAGTGACGGT AGCACCATGA GTTACCGCAC CCGGATACGG 
ACCCCAAGCT ATGCCCATTT GCAGCAGATC CCATCGGTTA TCCGTGGCAG TTTGGTATCT 
GACCTGATCG TCTATCTGGG CAGTATCGAT TTTGTAATGT CTGATGTGGA CCGCTAA 

 

Protein sequence

MTDLTTSDSL QPAWQTRDHL DDPVIGELSN RFGPEAFVVQ ATRTGMPVVW VKREQLLEVM 
SFLRKQPKPY VMLFDLHGVD ERLRTHRQGL PDADFSVFYH LLSIERNRDI MLKVALSEKD 
LHVSTATKIF PNANWYERET WEMFGITFDG HPHLTRIMMP QSWEGHPLRK DYPARATEFD 
PYVLTKQKED LEMESLTFKP EDWGMKRGTE NEDFMFLNLG PNHPSSHGAF RIVLQLDGEE 
IIDCVPDVGY HHRGAEKMGE RQSWHSYIPY TDRIEYLGGC VNEMPYVLAV EKLAGIVVPD 
RVNTIRVMLS ELFRINSHLL YISTFIQDVG AMTPVFFAFT DRQKVYDVIE AITGFRMHPA 
WFRIGGVAHD LPRGWERLLR DFLDWMPKRL DSYVKAALQN SILKGRSVGV AAYNAKEALE 
WGVTGAGLRA TGVEFDVRKW RPYSGYENFD FEVPVGNNGD CYDRVMLKVE ELRQSLRILE 
QCYKNMPEGP FKADHPLTTP PPKERTLQHI ETLITHFLQV SWGPVMPANE SFQMIEATKG 
INSYYLTSDG STMSYRTRIR TPSYAHLQQI PSVIRGSLVS DLIVYLGSID FVMSDVDR