Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1441 |
Symbol | |
ID | 5385632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1678581 |
End bp | 1679615 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864424 |
Product | LacI family sugar-binding transcriptional regulator |
Protein accession | YP_001400420 |
Protein GI | 153947671 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.110495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA TACGCAAGCG CCGTAATACC GGGCGGGTCA CGCTACAGGA AGTAGCCGAT TATGCTGGGG TAGGCTCGAT GACTGTTTCC CGAGCGCTAC GAACGCCGGA ACAGGTCTCA GATAAGTTAC GTGAGAAAAT AGAGCAAGCG GTTGAAAAAT TAGGCTACAT TCCAAACCGT GCCGCCGGTG CTTTAGCGTC AGGGCACAGC GATACCGTGG CGGTGTTGAT TCCGTCTTTA ACCGATAAAG CCAGCTCTCG GTTTATGCAG GCACTACAGC AAATTCTCAA TAAAAATGAA TTTCAGTTAT TGCTGGGTTG CCATGAATAC AATCAACGTA AAGAAGCTGA GATTCTCATG ACGTTACTGC AAAGCCACCC GGCGGCAGTG GTGATATTTG GCTCGCAGTT GGCGGATAAG ACATATCAGA TTCTTGAGCG CACCAATATT CCTATCGTTA ATGTTGTCGG CTCCTATTTT AAAGGGGCTA AAATTACCCT TGAAGCGGCT TTCTTTGAAT CGGCTTATGA ATTAACCCGT CACTTACTGG AGCGTGGCTA TCAACATATT GGCTATCTGG GGGCGCATCG GGATAATCAG TTGCAACGCC AGCAGCTCAA TGGATGGCAT AAGTCGATGC TCGAGCATTA CAAAAATGCT GACCAAACGG TCACCACGCC TGATGCGGCC AGCTTACAAT TTGGCCGTTA TGCCTTGACG GAGATCTTAC TGCGCCAGCC TGAATTAGAT GCAGTGATAT GCAGCCACGA AGATATTGCA CTTGGTGTGC TGTTTGAATG CCAGCGGCGG CTGCTTAAAA TCCCTGGTGG CATTGCGGTT GCTTGCCTGG ATGGCTCAGA GAGCTGTGAT CAAACTCATC CAACGCTGAC CTCAATGCGT ATCGATTATA AAAAAATGGG GAAAGAGGCC GGTAAGATGC TGATTGATAT GCTCAATGAG GATGATGCCG GAGTGAAAAG TGTGCCCCTC AGCCAAAGTT TTAACTATAA ATTTGAACCA CGGCAAAGTA CCTAA
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Protein sequence | MEKIRKRRNT GRVTLQEVAD YAGVGSMTVS RALRTPEQVS DKLREKIEQA VEKLGYIPNR AAGALASGHS DTVAVLIPSL TDKASSRFMQ ALQQILNKNE FQLLLGCHEY NQRKEAEILM TLLQSHPAAV VIFGSQLADK TYQILERTNI PIVNVVGSYF KGAKITLEAA FFESAYELTR HLLERGYQHI GYLGAHRDNQ LQRQQLNGWH KSMLEHYKNA DQTVTTPDAA SLQFGRYALT EILLRQPELD AVICSHEDIA LGVLFECQRR LLKIPGGIAV ACLDGSESCD QTHPTLTSMR IDYKKMGKEA GKMLIDMLNE DDAGVKSVPL SQSFNYKFEP RQST
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