Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1407 |
Symbol | |
ID | 5385694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1646364 |
End bp | 1647170 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640864390 |
Product | hypothetical protein |
Protein accession | YP_001400386 |
Protein GI | 153949068 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.0345183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTGGT TTACCCTTGG TCCTGCCGTT TTGGGGATAC TCTTTGCCGT TGCATTATTA GCCGGGTTCA TTGATTCCAT TGCCGGCGGG GGCGGCTTGT TAACCGTCCC CGCACTGTTA GCGGTGGGAT TACCCCCAGC GCAGGCCTTG GCGACCAATA AGCTGCAATC TGTTGGCGGT TCGTTCTCCG CCAGCCTGTA CTTTATTCGT CGTGGTGCGG TTAACCTAAA GCAGCAAAAA CTGACAATTG CTCTGACGCT GGTGGGGTCG ATGCTCGGAG CGATTTTAGT TCAGTACATG CGGGCTGACA TTCTGCGACA AATTTTACCG CTGTTGGTGA TCGGTATTGG CGTCTATTTT TTACTCACCC CAAGACTGGG CGTGGTTGAT CAACAGCGCC GCTTGTCTGC TTTGCCTTTC GCATTAATTG CTGGTGGTGG GATCGGTTTT TACGATGGCT TCTTTGGCCC CGGTGCCGGT TCGTTCTATG CATTGGCCTT TGTTACCCTG TGCGGTTTTA ATCTGGCAAA ATCCACCGCC CATGCCAAAG TACTCAATTT CACGTCAAAT TTAGGCGGGC TAATATTCTT TATCATCGGC GGGAAGGTGG TGTGGAGTAT CGGCTTGGTG ATGCTGGTGG GGCAAGTCCT GGGGGCGCGC CTTGGCGCAC ATATGGTATT GACGCGTGGT CAGAAATTAA TTCGGCCAAT GATTGTCGTG GTGTCATTCG TCATGAGTTG CAAGCTGCTG TATGACAACC ACGGTGCTGA AATTGGCTCT TGGCTGGGAC AGCATGTTTT TGCATAG
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Protein sequence | MDWFTLGPAV LGILFAVALL AGFIDSIAGG GGLLTVPALL AVGLPPAQAL ATNKLQSVGG SFSASLYFIR RGAVNLKQQK LTIALTLVGS MLGAILVQYM RADILRQILP LLVIGIGVYF LLTPRLGVVD QQRRLSALPF ALIAGGGIGF YDGFFGPGAG SFYALAFVTL CGFNLAKSTA HAKVLNFTSN LGGLIFFIIG GKVVWSIGLV MLVGQVLGAR LGAHMVLTRG QKLIRPMIVV VSFVMSCKLL YDNHGAEIGS WLGQHVFA
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