| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1390 |
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| Symbol | ccmD |
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| ID | 5385308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1629284 |
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| End bp | 1629646 |
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| Gene Length | 363 bp |
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| Protein Length | 120 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640864373 |
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| Product | heme exporter protein D |
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| Protein accession | YP_001400369 |
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| Protein GI | 153949158 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCCCG CTTTTCACTC ATGGGCAGAA TTTTTTGCCA TGGGCAACTA TGCCTTTTAT
GTCTGGCTCG CTGTGGCAGC CACCTTGTTA TCATTGCTGG GCTTGCTAAT GCACACGCTG
TGGCAGCACA AACAGCTACT GGCCGATATT CACCGCCGTC AGGCTCGGGA ACAACGTATT
CGTCAGGCGC AGCTTAACCA GACATCGATG CATCAAGTAC CGTTGCATCA ATCACCGTTG
CAACAATCAC CATTACATCA AGCACCATTA CATCAAGCAC CATTACATCA AGCACCATTA
CATCAAGCAC CATTACAACA AGCACCCCAG CACATCGCCA ATTTACAGGA GAAGCGACCG
TGA
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| Protein sequence | MTPAFHSWAE FFAMGNYAFY VWLAVAATLL SLLGLLMHTL WQHKQLLADI HRRQAREQRI
RQAQLNQTSM HQVPLHQSPL QQSPLHQAPL HQAPLHQAPL HQAPLQQAPQ HIANLQEKRP
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