Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1371 |
Symbol | |
ID | 5386294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1606706 |
End bp | 1608055 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864353 |
Product | hypothetical protein |
Protein accession | YP_001400350 |
Protein GI | 153949757 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAACTA ACAAAGTCGT TTGGAGTGAG GGGCTTTTTC TTCGCCCACA ACTTTTTCAA CAGCAAGAGC GCTATCTTGA ATATTACGCC CATAAGCGAG CGGCAACGAT AACCCCATTC TTTTGGGGAT TTGCGCAATA TGAAATTGAT AGAGAAGCAC TCTCGTATGG CAAATTAGTA TTGCGATCTG GGAAGGGCGT GTTACCCGAC GGTACACCAT TTGATATTCC CGGCCATGCT GAATTGCCTG AACCGCTCAC TATCACCCCA GAACATCTGG GTAAGTTGAT CTATCTGGCG GTCCCACTGC GCCTGGATAA CAGTGATGAA ACCATTTTTG ATGAGCACGA TATGAGCTCA TTGGCACGTT TTTACGCCTA TGAAGCTGCG CTCAACGATA CCAATGCCAT TCGGCAAGGG CCGAAGCCGG TACAACTGTC AAGATTACGC CTCAGATTAG TCTCAGAAGG TGAGATGACA GAATCATGGA TTGGGCTGCC ATTAACCAAA GTCAGAGCGA TTCAGCCTGA TGGTAGTGTC TTGCTACACA CCGAAGATTA TATTCCTCCG GTGACGGGTT ATGCCGCAAG TTCATTGCTG TCTGAATGGT TAACCCATCT TAATGGTTTG GTTAAAATGC GCGCAGAGAT GTTGGCCAAT CGCTTGTCAA ACAGTGATGG GAAAGCGAGC GCCAGCGCAG AAATTGTCGA TTATTTGCTA CTGCAAATTT TTAATAAATA TGAGCCGATT CTCGATCATT TAAGGCACAT TCCTGAATTA CCGCCTATTA CGCTTTATCA GGAATTGGCT AAGTTCTCGG GGGAATTATC TACCTTTATC CGGACCAAAA CCCGCCGACC CCGTCCGGCA CCTGGCTATG ATCATGCGAA GCTCTATGCG TCTATTCGTC CGTTGGTTGA CGAAGTTCAT GAACTACTGA ACCAGATCTT GGTGCGTGCT GGGCAGATGA TACCGCTGGA GACGAAAGGC AATGGCGTTT GGTCTGCCTC CGTACTGCCT AATGAATTAC GCTCGTTTTC AAATCTGGTC CTTGCCGTTC ATGCGCAATT ACCGATGGAT GTGCTACAGC ATCAATTTTC AGTACAAACA AAAATCAGCG CACCTCAGCA ATTACATGAA CTGGTGCGAT CGCATTTGCC AGGGTTGGAA CTACAGCGTT TGCCGGTACC GCCCAGACAA ATTCCGTATA GCGCAGGGTA CGTTTATTTT GAATTGATAA AAAATGGCCC CTTCTGGGAC AAGGTTTCCA ATGCTGGTGC CATCGCCTTG CACGTGGCGG GTGATTTCCC TGCCTTGAAA ATGGAGCTCT GGGGGATTAG AGATTCATGA
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Protein sequence | MRTNKVVWSE GLFLRPQLFQ QQERYLEYYA HKRAATITPF FWGFAQYEID REALSYGKLV LRSGKGVLPD GTPFDIPGHA ELPEPLTITP EHLGKLIYLA VPLRLDNSDE TIFDEHDMSS LARFYAYEAA LNDTNAIRQG PKPVQLSRLR LRLVSEGEMT ESWIGLPLTK VRAIQPDGSV LLHTEDYIPP VTGYAASSLL SEWLTHLNGL VKMRAEMLAN RLSNSDGKAS ASAEIVDYLL LQIFNKYEPI LDHLRHIPEL PPITLYQELA KFSGELSTFI RTKTRRPRPA PGYDHAKLYA SIRPLVDEVH ELLNQILVRA GQMIPLETKG NGVWSASVLP NELRSFSNLV LAVHAQLPMD VLQHQFSVQT KISAPQQLHE LVRSHLPGLE LQRLPVPPRQ IPYSAGYVYF ELIKNGPFWD KVSNAGAIAL HVAGDFPALK MELWGIRDS
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