| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1215 |
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| Symbol | mdtA |
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| ID | 5385078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1430918 |
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| End bp | 1432252 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640864193 |
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| Product | multidrug efflux system subunit MdtA |
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| Protein accession | YP_001400196 |
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| Protein GI | 153947015 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTC AATCCAAACG CACTTCCCGA TTATTCGTAT TCGTGGGGGG AGTGGTGGCG
ATCATTATTG CGGTGCTTAG TTGGCGCTAC TTCGGTACCG GCTCCGATAA CAATACGTCA
GGTGCTCAGC AGAGTGCCCG TGGTCAGGAC ACTAGCCATG GTGGCCGTCG TAATACACCG
CTGGCACCGG TGCAGGCCGC AACCGCAACC GAGCAGGAAG TGCCACGTTA TCTCACTGGC
TTAGGGACGG TCATTGCCGC CAATACTGTC ACGGTAACCA GCCGAGTGGA TGGTGAATTG
ATGGCCCTTC ATTTCACTGA AGGGCAGCAG GTTAAGGCTG GCGATTTACT GGCAGAGATC
GATCCCCGCC CTTACGAAGT CCAACTGACG CAGGCTCAGG GGCAGTTGGC CAAAGATCAG
GCCACGCTGG ATAACGCCCG TCGTGATCTG GCCCGTTATC AGAAATTGTC CAAAACTGGC
CTGATTTCGC AACAGGAACT GGATACGCAA TCTTCGCTGG TACGCCAGAG CGAGGGCAGT
GTGAAAGCCG ATCAGGGCGC TATCGACAGC GCCAAATTGC AACTGACGTA TAGCCGTATT
ACCGCGCCTA TCTCCGGTAG AGTGGGCCTG AAACAAGTGG ATGTCGGCAA TTACATTACC
AGCGGCACGG CCACACCGAT TGTGGTGATC ACCCAGACAC ATCCCGTTGA TGTGGTCTTT
ACCCTGCCAG AAAGCGATAT TCCCGCCATT ATACAAGCAC AGAAAAATGC GGAGAAGACT
CACGCCATCG TGCCCGTGGA AGCGTGGGAT CGGACGAATA AACAGATGCT GGCACAGGGC
TACCTGCTCA GTATTGATAA CCAGATTGAT ACCACGACGG GCACCATTAA ACTGAAGGCC
CGCTTTAATA ATGAAGATGA TGTGCTGTTC CCTAATCAGT TTGTTAACGC CCGTATCAAG
GTCGATTTGC TGCAAAATGC TGTCGTGGTG CCCACCGCAG CGGTACAAAT GGGCAGCGAA
GGTAACTTTG TCTGGACGTT AGATGATGCA AATAAAGTCA GCAAACATCT GGTCACCACC
GGGATTCAGA ATAGCCAACA AGTGGTTATC GACGCAGGCC TGAACGCTGG GCAACGCGTG
GTCACGGATG GTATTGATCG CCTGACCGAG GGGGTACAGG TTGAAGTGGT GACACCACGC
AGCGCCAATA CTGATGCTAA TCCAGCCAGT GCAGAGAAAG CGGCTGCAGA AGCAGAAGGC
AGCACCCCGC ATCAAGGCCG AGGGCGTCCG GCCAATGCGC CTGCACGTAG CACCACGGCT
GCGGAGAAAT CCTGA
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| Protein sequence | MKSQSKRTSR LFVFVGGVVA IIIAVLSWRY FGTGSDNNTS GAQQSARGQD TSHGGRRNTP
LAPVQAATAT EQEVPRYLTG LGTVIAANTV TVTSRVDGEL MALHFTEGQQ VKAGDLLAEI
DPRPYEVQLT QAQGQLAKDQ ATLDNARRDL ARYQKLSKTG LISQQELDTQ SSLVRQSEGS
VKADQGAIDS AKLQLTYSRI TAPISGRVGL KQVDVGNYIT SGTATPIVVI TQTHPVDVVF
TLPESDIPAI IQAQKNAEKT HAIVPVEAWD RTNKQMLAQG YLLSIDNQID TTTGTIKLKA
RFNNEDDVLF PNQFVNARIK VDLLQNAVVV PTAAVQMGSE GNFVWTLDDA NKVSKHLVTT
GIQNSQQVVI DAGLNAGQRV VTDGIDRLTE GVQVEVVTPR SANTDANPAS AEKAAAEAEG
STPHQGRGRP ANAPARSTTA AEKS
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