Gene YpsIP31758_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1210 
SymbolbaeR 
ID5385147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1421113 
End bp1421832 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content53% 
IMG OID640864188 
ProductDNA-binding transcriptional regulator BaeR 
Protein accessionYP_001400191 
Protein GI153949110 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000498147 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAGT CGCTTCTGTC TGCCAGCCAG TCTGGCTCTG TATTGATCGT TGAAGATGAA 
CCCAAACTTG GCCAGCTACT CGTCGATTAC CTGCAAGCCG CGGGTTACCG CACCCAGTGG
CTGACCAACG GGGCCGAGGT CGTGGCAACG GTTCGCCAAA CGCCACCCGC CATCATCTTG
CTGGATCTCA TGCTGCCCGG CAGTGATGGC ATCACCCTAT GCCGTGAAAT CCGCCGTTTC
TCTGATATTC CTATTGTCAT GGTGACGGCA AAAACGGAAG AGATTGATAG GCTCTTGGGG
CTGGAGATTG GCGCTGATGA CTATATCTGC AAGCCCTATA GCCCACGGGA AGTGGTCGCT
CGGGTCAAAA CCATTCTACG CCGCTGCTCT CAGCAACGTC ATCAACCCAC CGATGACGCA
CCACTGCTGA TCAATGAATC CCGTTTTCAG GCGAGTTACC AAGGGCATAT GCTGGAATTA
ACCCCGGCAG AATTCCGCTT ACTGAAAATA TTAGCCTCCC AACCGGGCCA TGTTTTCAGC
CGGGAACAAC TGCTGAACAA CCTTTACGAC GATTACCGGG TAGTGACTGA TCGCACCATT
GACAGCCATA TCAAAAATCT ACGGCGGAAA CTGGAATTAC TCGATGGCGA AAAACCGTTC
ATCCGCGCGG TATATGGTAT GGGATATCGC TGGGAAGCAG AGATGTGCCG TTTGTTGTAA
 
Protein sequence
MHESLLSASQ SGSVLIVEDE PKLGQLLVDY LQAAGYRTQW LTNGAEVVAT VRQTPPAIIL 
LDLMLPGSDG ITLCREIRRF SDIPIVMVTA KTEEIDRLLG LEIGADDYIC KPYSPREVVA
RVKTILRRCS QQRHQPTDDA PLLINESRFQ ASYQGHMLEL TPAEFRLLKI LASQPGHVFS
REQLLNNLYD DYRVVTDRTI DSHIKNLRRK LELLDGEKPF IRAVYGMGYR WEAEMCRLL