| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1207 |
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| Symbol | |
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| ID | 5384373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1417418 |
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| End bp | 1418308 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640864184 |
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| Product | lipid kinase |
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| Protein accession | YP_001400188 |
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| Protein GI | 153950648 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.00837646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACACA CTCTTTTGAT CCTCAACGGC AAAGAATCAG GCAACCCTGA GGTCCGCGAA
GCGGTCAAAA ACGTACGCGA CGAAGGCTTA ACGCTTCATG TCCGTATCAC CTGGGAGCAC
GGTGATGCAA AACGCTATGT TGAAGAGGCC GCCACCTTGG CTGTCAGTAC CGTTATCGCT
GGAGGCGGCG ATGGCACCAT TAATGAAGTG GCAACAGCAT TGATGAGTTT ACCTGCGGAT
AAACGCCCTT GTCTGGGGAT CCTACCGCTG GGAACCGCCA ATGATTTTGC GACTGGCTGC
AATATCCCTT TGCAAATAGA GAACGCACTG CAACTGGCGG TCAAAGGCCG GGCGGTGGCA
ATCGATCTGG CTCAAGTCAA CGGTGAGCAT TACTTTATCA ATATGGCAAC CGGGGGTTTT
GGTACCCGAA TTACCACCGA AACACCCGAT AAACTCAAAG CGGCCTTGGG CGGAGTCTCT
TACTTTATTC ATGGGCTGAT GCGCCTTGAT GCCCTAAAAG CAGACAGCTG TAAAATCCAT
GGCCCTGACT TTCATTGGTC GGGGGATGCG CTGGTCATTG GCATCGGCAA CGGTAAACAG
GCCGGGGGCG GACAACTTCT TTGCCCCGAT GCACTGATTA ATGACGGCCT GATGCAATTA
CGCCTACTGA CAGCAAAGGA GTTACTCCCT GCAGTGCTGA GTACCCTGTT CAATGGTGAG
AAAAATAAGA ATGTTATCGA CGCCACGGTA CCTTGGCTCG ATATCACTGC ACCGAACGAT
ATCACCTTCA ATCTGGATGG TGAGCCACTG TCCGGCAGAC ATTTCCACAT TGAAATCTTA
CCCCATGCGA TTCAGTGCCG GCTACCACCG AATTGCCCGT TGTTAGGCTA A
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| Protein sequence | MPHTLLILNG KESGNPEVRE AVKNVRDEGL TLHVRITWEH GDAKRYVEEA ATLAVSTVIA
GGGDGTINEV ATALMSLPAD KRPCLGILPL GTANDFATGC NIPLQIENAL QLAVKGRAVA
IDLAQVNGEH YFINMATGGF GTRITTETPD KLKAALGGVS YFIHGLMRLD ALKADSCKIH
GPDFHWSGDA LVIGIGNGKQ AGGGQLLCPD ALINDGLMQL RLLTAKELLP AVLSTLFNGE
KNKNVIDATV PWLDITAPND ITFNLDGEPL SGRHFHIEIL PHAIQCRLPP NCPLLG
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