| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1203 |
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| Symbol | thiD |
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| ID | 5385848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1414643 |
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| End bp | 1415443 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640864180 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001400184 |
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| Protein GI | 153949251 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.564031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGTA TTAATACACT GACGATTGCC GGTACTGACC CGAGTGGTGG GGCGGGTATT
CAGGCTGATC TGAAAACATT CTCTGCTTTA CGGGCCTATG GTACCAGTGT CATTACCGCG
CTGGTGGCAC AAAACACCCG TGGTGTGCAG TCGGTTTATC CTATCGATCC TCATTTTGTT
GCCGCTCAGT TGGATTCCGT TCTCAGTGAC GTGCGTATCG ACAGCGCCAA AATTGGTATG
CTGGCGAATA CTGCGGTGGT CGAAATGGTC GCCGAGCAGT TGCGCCGTTA TCCTATTCCG
TTCGTGGTTT TGGATACGGT GATGGTGGCC AAAAGTGGAG ATCCGCTATT GGCACCTGAC
GCCGTGGAGG CCGTTCGTCA GTGGCTGTTG CCGCAAGTCG CATTAATTAC GCCGAATTTG
CCAGAGGCCG CCGCGTTACT GGGGTGTCCA CCGGCCTGCA ATGAACAACA AATGCGTGAG
CAGGGACGGG CGCTATTAGC CTTAGGCTGT CAGGGGGTGT TAATGAAAGG CGGGCACTTA
ACCGGCGAGG ATAGCCCAGA CTGGTTGTTT ACCGCAGAGG GGGAGCAGCG TTTTGTGGCT
CAACGCGTGG CTACCCGGAA TACTCATGGT ACGGGGTGTA CGCTATCGGC GGCATTGGCA
GCACTGCGCC CGCGATACGG CCATTGGGGG GAAACGGTGG CGGTAGCTAA ACACTATTTG
CAATGTGCGC TGGAACAGGC CGATACCCTG GAGGTGGGGC AGGGCGTTGG GCCTGTTCAT
CATTTTCATC AATGGTGGTA A
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| Protein sequence | MKRINTLTIA GTDPSGGAGI QADLKTFSAL RAYGTSVITA LVAQNTRGVQ SVYPIDPHFV
AAQLDSVLSD VRIDSAKIGM LANTAVVEMV AEQLRRYPIP FVVLDTVMVA KSGDPLLAPD
AVEAVRQWLL PQVALITPNL PEAAALLGCP PACNEQQMRE QGRALLALGC QGVLMKGGHL
TGEDSPDWLF TAEGEQRFVA QRVATRNTHG TGCTLSAALA ALRPRYGHWG ETVAVAKHYL
QCALEQADTL EVGQGVGPVH HFHQWW
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