| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1162 |
|---|
| Symbol | |
|---|
| ID | 5387720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1365838 |
|---|
| End bp | 1366995 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640864138 |
|---|
| Product | putative 3-phenylpropionic acid transporter |
|---|
| Protein accession | YP_001400142 |
|---|
| Protein GI | 153950630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00902] phenyl proprionate permease family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 8.92917e-16 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTGC AATCAACACG TTGGCTATCG CTCAGCTATT TCACCTATTT TTTTTCTTAT
GGTATTTTTC TGCCTTTTTG GGGACTCTGG TTAGAAGGTG AAGGTATCCC CCCGGAAACC
ATCGGTATTT TGCTCGGTGC TGGTTTACTC TCCCGCTTCC TTGGCAGCCT CATTATTGCT
CCGAGAGTAA AAGATCCTTC TCATCTGGTT ACTGCAATCC GTATTTTGGC ACTTCTGACG
TTAGCGTTTG CGGTCGGTTT TTGGTTTGGT AACGGCTGGG CTTGGTTGAT GGTGGTTATC
GCAGGTTTTA ACCTGTTCTT TGGCCCACTG GTACCATTGA CCGATGCTTT GGCTGCGACG
TGGCAAAAAC AGATCACCAT GGATTACGGC AAGGTCCGGT TATGGGGGTC GCTGGCGTTT
GTTATCGGCT CTGCGCTGAC GGGAAAATTG GTATCCGTTT GGGGCCATCC CGCTATTCTC
TACAGCCTGC TGTTTGGTGT GACAGCGATG TTGCTGGGGG CATTGTTACG GCCTGGTGTG
ATGCCACGGG GTGAGGTTAA ACATCGCAAT GTTGCTGCAA CGCCATGGAA GGTTCTATTA
TCCGAGCCGC AAGTTTGGCG CTTTTTGCTC TGTGTGACGT TATTACAGGG TGCCCACGCG
GCTTACTACA GTTTCAGTTC TATTTACTGG AAAGATGCCG GTTATTCCCC CGCAACCATC
GGCTATTTGT GGTCGCTGGG GGTTGTGGCC GAAATTCTGG TATTTGCGTT CAGTCACATC
CTTTTCCGTC GATGGACAGC CCGTAGCTTA TTACTGCTCT CAGCGGTAAG TGGGATAATC
CGCTGGAGCT TAATGGCTTC AACGACTGAA TTGCCTTGGT TGATTTTTAT CCAAATTTTA
CATTGTGGTT CGTTTACTGT CTGCCATCTG GCCGCGATGC GTTTCATTTC GGCCCGCAGT
GGGGCGGATG TGATCCGTTT GCAATCAGTC TACTCGGCGC TAGCGATGGG CGGCGGTATT
GCGGTGATGA CAGTGATTTC CGGCTTCTTA TTTGAGAATT ATCAGAGTGG GGTCTTTTGG
GTTATGGCGC TCATTGTTAT TCCGGCGCTG TTTATCCGGC CACGAGTGGC CGCGAACCCA
AATGAATTAG CCAGCTAA
|
|---|
| Protein sequence | MVLQSTRWLS LSYFTYFFSY GIFLPFWGLW LEGEGIPPET IGILLGAGLL SRFLGSLIIA
PRVKDPSHLV TAIRILALLT LAFAVGFWFG NGWAWLMVVI AGFNLFFGPL VPLTDALAAT
WQKQITMDYG KVRLWGSLAF VIGSALTGKL VSVWGHPAIL YSLLFGVTAM LLGALLRPGV
MPRGEVKHRN VAATPWKVLL SEPQVWRFLL CVTLLQGAHA AYYSFSSIYW KDAGYSPATI
GYLWSLGVVA EILVFAFSHI LFRRWTARSL LLLSAVSGII RWSLMASTTE LPWLIFIQIL
HCGSFTVCHL AAMRFISARS GADVIRLQSV YSALAMGGGI AVMTVISGFL FENYQSGVFW
VMALIVIPAL FIRPRVAANP NELAS
|
|---|
| |