Gene YpsIP31758_1160 details

Gene Information

• Locus tag: YpsIP31758_1160
• Symbol: ail
• ID: 5385943
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1364929
• End bp: 1365468
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640864137
• Product: attachment invasion locus protein
• Protein accession: YP_001400141
• Protein GI: 153947143
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3637] Opacity protein and related surface antigens
• TIGRFAM ID: [TIGR03304] outer membrane insertion C-terminal signal

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 6.92969e-19
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAGA CATTACTGGT CTCTTCTTTA ATTGCATGTT TATCAATTGC GTCTGTTAAT 
GTGTATGCCG AAGGCGAAAG CAGTATTTCT ATTGGATATG CTCAAAGTCG TGTCAAGGAA 
GATGGGTACA AGTTGGATAA AAATCCAAGA GGTTTCAACC TGAAGTATCG TTATGAATTC 
AATAATGACT GGGGAGTGAT AGGTTCATTT GCTCAGACTC GCCGGGGGTT CGAGGAATCT 
GTTGACGGAT TCAAACTTAT TGATGGTGAT TTTAAGTACT ACTCAGTGAC TGCGGGGCCT 
GTTTTCCGCA TTAACGAGTA TGTTAGCTTG TATGGATTAT TGGGGGCAGG TCATGGAAAG 
GCTAAAGTTT CCTCAATATT TGGTCAATCA GAGAGTAGAA GTAAAACATC TCTGGCATAC 
GGTGCCGGAT TACAATTTAA TCCACATCCA AATTTTGTCA TTGATGCTTC ATATGAATAC 
TCCAAACTCG ATGATGTGAA AGTGGGTACT TGGATGCTTG GCGCGGGTTA CCGGTTCTAA 

 

Protein sequence

MNKTLLVSSL IACLSIASVN VYAEGESSIS IGYAQSRVKE DGYKLDKNPR GFNLKYRYEF 
NNDWGVIGSF AQTRRGFEES VDGFKLIDGD FKYYSVTAGP VFRINEYVSL YGLLGAGHGK 
AKVSSIFGQS ESRSKTSLAY GAGLQFNPHP NFVIDASYEY SKLDDVKVGT WMLGAGYRF