Gene YpsIP31758_1134 details

Gene Information

• Locus tag: YpsIP31758_1134
• Symbol: lepA
• ID: 5386134
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1334507
• End bp: 1336306
• Gene Length: 1800 bp
• Protein Length: 599 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640864110
• Product: GTP-binding protein LepA
• Protein accession: YP_001400115
• Protein GI: 153947197
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0481] Membrane GTPase LepA
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01393] GTP-binding protein LepA

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0000478112
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCACA TAAGAAACTT TTCTATTATT GCCCATATTG ACCACGGTAA GTCGACGCTG 
TCTGATCGGA TTATTCAGAT CTGTGGCGGT TTATCTGAGC GTGAAATGGC CGCACAGGTA 
CTGGATTCCA TGGATCTAGA ACGTGAGCGT GGTATTACCA TCAAGGCACA GAGTGTGACG 
CTTGATTACC ATTCGAAGGA TGGTCAAACC TATCAACTTA ACTTTATCGA TACCCCCGGC 
CATGTTGACT TCTCTTATGA AGTTTCACGC TCTTTAGCCG CGTGTGAAGG GGCTCTATTG 
GTTGTGGATG CAGGGCAAGG CGTTGAGGCT CAGACGCTAG CAAACTGCTA CACCGCGATG 
GAGATGGACC TGGAAGTTGT TCCGGTTCTG AACAAAATTG ATTTGCCTGC TGCCGATCCT 
GAGCGGGTTG CTGAAGAAAT CGAAGACATT GTGGGGATTG ATGCCACTGA TGCGATTCGT 
TGCTCGGCAA AAACCGGTGT GGGCGTGCCT GATGTTCTTG AGCGGTTGGT CCGCGATATT 
CCAGCCCCTG AGGGGGATCC AAATGGGCCA TTGCAGGCAT TGATTATCGA TTCCTGGTTT 
GATAACTACC TGGGTGTTGT GTCATTAATA CGTATCAAGA ATGGTTCGTT GCGTAAAGGC 
GATAAAGTTA AGGTTATGAG TACCGGCCAG AGCTATAACG CGGATCGTTT AGGGATATTT 
ACACCAAAAC GTGTTGATCG TGATGTTCTG AACTGCGGCG AAGTCGGCTG GTTGGTTTGT 
GCAATAAAAG ACATTCTTGG CGCACCTGTT GGCGATACAT TGACATTAAC GCGTAACCCG 
GCAGAAAAAT CATTGCCTGG CTTTAAGAAA GTAAAACCAC AAGTTTATGC GGGCCTGTTC 
CCGATAAGCT CTGATGATTA TGAATCTTTC CGGGATGCGT TAGGTAAGTT AAGTCTTAAC 
GATGCCTCTT TGTTCTATGA ACCAGAAAGC TCTACAGCAT TAGGTTTTGG TTTCCGATGC 
GGCTTCCTTG GCTTGTTACA TATGGAGATC ATCCAGGAGC GTCTGGAGCG TGAATATGAT 
CTGGAACTGA TTACTACGGC ACCAACAGTG GTGTACGAGG TGATTACGAC CAATCAGGAA 
ACGGTCTATG TCGATAGCCC TTCTAAACTG CCTGCGTTGA ACAATATTGA AGAACTGCGC 
GAACCGATCG CTGAATGCCA TATGTTGTTG CCACAGGAAT ACCTCGGTAA CGTCATTACA 
TTGTGTATCG AAAAACGTGG TACACAGACC AATATGGTTT ATCACGGTAA GCAAGTCGCG 
CTGACATATG AAATTCCAAT GGCGGAAGTC GTGCTTGATT TCTTTGATCG TTTGAAATCA 
ACGTCACGGG GTTATGCTTC ACTGGATTAT AATTTCAAAC GCTTCCAGAC GTCTGACATG 
GTACGTGTTG ATGTATTAAT CAATAACGAA CGTGTGGATG CGCTGGCACT GATCACGCAT 
CGTGATAATG CACAATATCG TGGCCGTGAT TTGGTTGAGA AAATGAAAGA ACTGATCCCA 
CGTCAACAAT TTGATATTGC GATCCAGGCT GCGATTGGTA ACCACATCAT TGCTCGCTCA 
ACGGTAAAAC AGCTACGTAA AAACGTATTG GCGAAGTGTT ATGGTGGGGA TGTTAGCCGT 
AAGAAAAAAC TTCTGCAGAA ACAAAAAGAC GGTAAGAAAC GTATGAAGCA AGTCGGTAAC 
GTTGAATTAC CACAAGAGGC CTTCCTGGCT ATTCTGCATG TTGGAAAAGA CAGTAAATAA 

 

Protein sequence

MKHIRNFSII AHIDHGKSTL SDRIIQICGG LSEREMAAQV LDSMDLERER GITIKAQSVT 
LDYHSKDGQT YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAM 
EMDLEVVPVL NKIDLPAADP ERVAEEIEDI VGIDATDAIR CSAKTGVGVP DVLERLVRDI 
PAPEGDPNGP LQALIIDSWF DNYLGVVSLI RIKNGSLRKG DKVKVMSTGQ SYNADRLGIF 
TPKRVDRDVL NCGEVGWLVC AIKDILGAPV GDTLTLTRNP AEKSLPGFKK VKPQVYAGLF 
PISSDDYESF RDALGKLSLN DASLFYEPES STALGFGFRC GFLGLLHMEI IQERLEREYD 
LELITTAPTV VYEVITTNQE TVYVDSPSKL PALNNIEELR EPIAECHMLL PQEYLGNVIT 
LCIEKRGTQT NMVYHGKQVA LTYEIPMAEV VLDFFDRLKS TSRGYASLDY NFKRFQTSDM 
VRVDVLINNE RVDALALITH RDNAQYRGRD LVEKMKELIP RQQFDIAIQA AIGNHIIARS 
TVKQLRKNVL AKCYGGDVSR KKKLLQKQKD GKKRMKQVGN VELPQEAFLA ILHVGKDSK