Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1081 |
Symbol | ureF |
ID | 5387137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1285272 |
End bp | 1285958 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640864057 |
Product | urease accessory protein UreF |
Protein accession | YP_001400062 |
Protein GI | 153949916 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAT CAGATCTCAT TCGTATCATG CAATTTGGTG ATTCCGTACT GCCGGTCGGG GCCTTTACGT TTTCCAATGG CGTGGAATCT GCCATTCAAA CCGGCATCGT TCATGATGTA GCAACATTGA AAGGCTTCGT TTTGACAGCG TTGAAGCAGG CGGCCAGTTG TGATGGCATG GGCGTTGTCG CGGCTCATCG TGCTGTTGTG GCGGATGACC GTGACGGTAT TATCCGTGCT GACTGGGCGG TTAATAATCG TAAGTTAAAT GAAGAAAGCC GCCTGATGGC AACCCGCATG GGTAAAAAGC TGGCAGAAAT GTCGATCCAT GTGGTGGAGC ACCCATTGAT CAGCTGGTGG TTGGAACAAA TCAAAAATGG CAACACGGCG GGCACCTATC CGGTGACTCA AGCGGTGGTT ATGGCAGCAC AAGGGATCGG GCAGCGGGAA GTGGTTGTGA TGCATCAATA CGGTGTGGCG ATGACCATTT TAAGTGCGGC AATGCGCTTG ATGCGCGTTA CGCATTTCGA TACACAACAT ATCTTATTTG AACTGAACCA TGACATTGAG AAATTCTGCG ATATTGCCGA GATCGGCGAT ATTAACCAGA TGTCTTCTTA TGTCCCGATT GTGGATGTTT TGGCCGCCGT ACATGTGAAA GCCCATATTC GCCTCTTTAG TAACTGA
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Protein sequence | MNASDLIRIM QFGDSVLPVG AFTFSNGVES AIQTGIVHDV ATLKGFVLTA LKQAASCDGM GVVAAHRAVV ADDRDGIIRA DWAVNNRKLN EESRLMATRM GKKLAEMSIH VVEHPLISWW LEQIKNGNTA GTYPVTQAVV MAAQGIGQRE VVVMHQYGVA MTILSAAMRL MRVTHFDTQH ILFELNHDIE KFCDIAEIGD INQMSSYVPI VDVLAAVHVK AHIRLFSN
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