Gene YpsIP31758_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1043 
SymbolmetN 
ID5384744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1245584 
End bp1246615 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content48% 
IMG OID640864016 
ProductDL-methionine transporter ATP-binding subunit 
Protein accessionYP_001400027 
Protein GI153950217 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID[TIGR02314] D-methionine ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00000000163916 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAC TCACCCACAT CAGCAAAGTG TTCCAGCAGG GTTCGCGCAC TATTACCGCG 
CTATCAGACG TGAGTCTTCA CGTCCCTGCC GGGCAAATTT ATGGCGTTAT CGGCGCTTCT 
GGCGCAGGTA AAAGTACCCT GATTCGGTGC GCTAATATGT TAGAACGGCC AACCAGCGGT 
CAAGTTCTGG TTGATGACCA AGATCTGACC ACCTTGTCTG AAGGCCAATT AACACGCGCG 
CGTCGTCAGA TTGGCATGAT TTTTCAGCAC TTTAATTTAC TCTCATCACG CACTGTATAC 
GGCAATATTG CATTGCCTCT TGAGTTGGAC AATACATCGC GTGCAGATAT AAAGAAGAGA 
GTGAATGAAT TACTGGATTT AGTAGGGTTG ACCGATAAGC AAGATGCTTA CCCCGCTAAT 
CTATCCGGTG GGCAAAAACA GCGGGTCGCG ATCGCTCGCG CGCTGGCCAG TAATCCTAAA 
GTTTTGCTGT GTGATGAAGC CACCAGCGCA TTAGACCCAG CCACCACCCG CTCAATATTG 
GAGCTGCTAA AAGATATTAA CCGCCGTTTG GGGTTAACGA TTTTGCTTAT CACTCATGAG 
ATGGATGTCG TGAAACGCAT CTGTGATCAG GTTGCAGTAA TAAGTGAAGG CAAACTGATT 
GAAAAAGACA GTGTCAGTGA GGTGTTCTCT CATCCCAAGA CACCATTAGC ACAACAATTT 
ATTCAATCCA CCCTGCATTT GGATATTCCG GAAGATTACG CCAAACGTAT GAGCCCGGAG 
CCAACGGTAG ATCACGTCCC GCTTCTGAAG CTGGAGTTCA CCGGTAAGTC AGTTGATGCT 
CCGTTAATCT CACAAGCCGT GCGCCGCTTC AATATTGATA TCGGTATCCT AAGCTCGCAG 
ATGGATTATG CCGGTGGGGT GAAATTCGGT GTCATGTTGG CAGAGCTACA TGGCGACGTT 
CAGGATGGCC TGGCTGCCAT CAAGTTTTTA CAAGATCATC ATGTGAAAGT AGAGGTTCTG 
GGTTATGTCT GA
 
Protein sequence
MIKLTHISKV FQQGSRTITA LSDVSLHVPA GQIYGVIGAS GAGKSTLIRC ANMLERPTSG 
QVLVDDQDLT TLSEGQLTRA RRQIGMIFQH FNLLSSRTVY GNIALPLELD NTSRADIKKR 
VNELLDLVGL TDKQDAYPAN LSGGQKQRVA IARALASNPK VLLCDEATSA LDPATTRSIL 
ELLKDINRRL GLTILLITHE MDVVKRICDQ VAVISEGKLI EKDSVSEVFS HPKTPLAQQF 
IQSTLHLDIP EDYAKRMSPE PTVDHVPLLK LEFTGKSVDA PLISQAVRRF NIDIGILSSQ 
MDYAGGVKFG VMLAELHGDV QDGLAAIKFL QDHHVKVEVL GYV