Gene YpsIP31758_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1042 
SymbolmetI 
ID5384419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1244938 
End bp1245591 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID640864015 
ProductDL-methionine transporter permease subunit 
Protein accessionYP_001400026 
Protein GI153947643 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000000294871 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGG CAATGATGTG GTTAATGGCT CGAGGCGTCT GGGAAACTCT TATGATGACT 
TTTGTTTCCG GTTTCTTTGG CTTTGTTCTG GGGCTACCTG TAGGGGTGCT GTTATATGTC
ACCCGTCCTG GGCAAATTAT CGCTAACAAT AAAATTTATA GAACGCTGTC TGGTGTGGTG
AATATTTTCC GCTCCATTCC TTTTATTATC TTATTGGTAT GGATGATTCC ATTTACACGC
ATGATCGTCG GCACATCGAT TGGATTGCAG GCCGCTATCG TGCCGTTAAC GGTAGGAGCC
GCGCCTTTCA TTGCCCGTAT GGTGGAAAAC GCTCTGCTAG AGATTCCGTC AGGTTTGGTT
GAAGCGGCAC GTGCGATGGG CGCAACACCG ATGCAGATCA TCAAAAAGGT ATTATTACCA
GAAGCCCTGC CCGGCTTAGT GAATGCGGCA ACGATTACAT TAATTACTCT GGTAGGCTAT
TCCGCTATGG GAGGAGCAGT AGGCGCCGGT GGCTTAGGTC AAATCGGTTA TCAGTATGGT
TATATTGGGT ATAACGCTAC GGTGATGAAT ACTGTATTAG TATTACTAGT AATTCTGGTC
TACCTAATTC AGTTAAGTGG TGATCGGATA GTCAAAGCCG TTACGCACAA ATAG
 
Protein sequence
MSEAMMWLMA RGVWETLMMT FVSGFFGFVL GLPVGVLLYV TRPGQIIANN KIYRTLSGVV 
NIFRSIPFII LLVWMIPFTR MIVGTSIGLQ AAIVPLTVGA APFIARMVEN ALLEIPSGLV
EAARAMGATP MQIIKKVLLP EALPGLVNAA TITLITLVGY SAMGGAVGAG GLGQIGYQYG
YIGYNATVMN TVLVLLVILV YLIQLSGDRI VKAVTHK