| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1028 |
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| Symbol | dnaE |
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| ID | 5385246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1231192 |
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| End bp | 1234674 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640864001 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001400012 |
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| Protein GI | 153947435 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAC CTCGTTTTGT CCACCTGCGT GTTCATAGCG ATTATTCCAT GATCGATGGA
TTAGCTAAGA TTGGACCTTT GGTGAAAAGA GCTGCTGCAT TAGGTATGCC TGCTCTGGCT
ATTACCGATT TTACTAACCT CTGTGGCCTG GTGAAATTCT ACGGCAGCGC GCATGGTGCG
GGGATTAAAC CCATCATCGG TGCTGACTTC TACGTACAAA GTGAAATACT GGGTGATGAA
TTAGCTCACC TCACGGTTTT GGCTCGCAAT AATGAAGGTT ATCAAAATCT GACTTTATTG
ATCTCAGAAG CCTACCAACG GGGTTATGGC GCTGCGGGTC CTATCATTGA TCGCGATTGG
CTGATCAAAC ATAAAGAAGG ACTCATTCTG CTGTCTGGTG GCCGAATGGG GGATGTAGGC
AAATTTCTGC TACGGGGTAA CCAGGTTCAG GTTGATCAAT GTCTCGCCTT TTATCAGGAA
CACTTTCCAG ACTGCTATTA CCTCGAACTT ATTCGAACCG GGCGTCCAGA CGAAGAAAAC
TATCTTCATG CTGCCGTGGC ATTGGCCACT GAGCGTGGTT TACCTGTCGT TGCGACCAAT
GATGTGCGTT TTATTGATGA ATCGGATTTT GATGCCCATG AAATCCGTGT CGCTATCCAT
GATGGTTTTA CATTGGTCGA TCCTAAACGG CCGAAGAATT ACAGCCCTCA GCAGTTTATG
CGCGATGAAG AACAGATGTG TGAGCTGTTC GCTGATATTC CAGAAGCGTT GATCAACAGC
GTTGAGATAG CCAAACGCTG TAATGTCACT ATTCGCCTTG GGGAATATTT CTTACCGCAG
TTCCCCACAG GGGAGATGAG TACAGAAGAT TTTCTGGTAG AAAAAGCCAA ACAAGGTTTG
GAAGAACGTT TGGAATTTCT GTTTCCGGAC CCTGAGGTTA GGCTGCAAAA ACGGCCAGAA
TATGATGAAC GTCTGGATAT CGAGCTCAAA GTTATCAACC AAATGGGCTT CCCTGGTTAC
TTCCTGATTG TAATGGAGTT TATCCAGTGG TCGAAAGATA ACGGCGTACC GGTGGGGCCG
GGGCGTGGCT CTGGTGCAGG CTCATTGGTG GCTTATGCCC TGAAAATTAC TGATATTGAC
CCACTGGAAT TTGATCTACT GTTCGAGCGC TTCCTTAATC CGGAACGTGT ATCGATGCCT
GACTTCGACG TTGACTTCTG TATGGAGAAA CGTGATCTGG TGATCGAACA CGTGGCGGAA
ATGTATGGCC GCGATGCGGT TTCCCAGATA ATTACCTTCG GTACCATGGC GGCTAAAGCG
GTCATCCGCG ATGTCGGCCG TGTATTAGGC CATCCCTATG GCTTTGTTGA TCGGATCTCA
AAATTAATCC CACTCGATCC GGGGATGACA CTGGAAAAAG CGTTTGCAGC GGAGCCACAG
CTAGCTGAAA TTTATGAAGC TGATGAAGAG GTCAGGGCGC TAATTGATAT GGCGCGTAAG
CTGGAAGGAG TAACGCGAAA CGCCGGGAAA CATGCTGGAG GCGTGGTTAT TGCCCCCACT
AAGATTACCG ATTTTGCCCC ACTCTATTGT GATGCGGAAG GCAATAACCC AGTTACGCAG
TTTGATAAAA ATGATGTGGA ATATGCTGGG CTGGTGAAGT TTGACTTCCT CGGTCTACGT
ACACTAACCA TCATTAATTG GGCGTTGGAG ATGATTAACG CCCGGCGCGC TAAAACTGGA
TTGGAACCCA TTGATATCGC CTCTATTCCG CTGGAGGATA AAAAAAGCTT CGATATGCTG
CAACGTTCGG AAACGACAGC AGTATTCCAG CTGGAATCCA GAGGGATGAA AGACTTGATC
AAGCGCCTGA AGCCCGACTG CTTCGAGGAC ATGATCGCCT TAGTGGCGTT ATTTCGTCCC
GGTCCGTTAC AATCAGGGAT GGTTGATAAC TTTATTGACC GTAAACACGG CCGGGAAGCG
ATATCTTACC CAGATATTGA GTGGCAACAT GAATCCTTGA AACCTGTGCT TGAGCCGACC
TACGGCATTA TCTTGTATCA GGAACAGGTC ATGCAAATTG CGCAGGTTCT GTCCGGCTAC
TCACTGGGTG GTGCGGACAT GTTGCGTCGT GCCATGGGTA AGAAAAACCC TGCTGAGATG
GCTAAGCAGC GTTCTGTATT TGAAGATGGT GCGAAAAATC AGGGTATTGA TGGTGAGCTG
GCGATTAAAA TCTTTGACCT GGTTGAGAAA TTTGCAGGTT ACGGTTTTAA CAAATCTCAC
TCGGCAGCTT ATGCATTAGT CTCCTATCAA ACGTTGTGGT TAAAAGCCCA TTATCCGGCT
GAATTTATGG CTGCAGTAAT GACCGCTGAT ATGGATAATA CGGACAAAGT GGTCGGCTTG
GTCGATGAAT GCTGGCGTAT GGGGCTGAAA ATTCTGCCCC CTGACATCAA CAGCGGTTTG
TACCATTTCC ATGTAAACGA TGATGGCGAA ATTGTTTATG GTATTGGTGC CATTAAAGGT
GTAGGTGAGG GGCCGATAGA AGCCATTCTG GAGGCGCGTA AAGAGGGGGG CTATTTTAAA
GAGTTATTTG ACCTATGCGC CCGTGTCGAT ACCAAAAAGC TTAACAAGCG TATTTTAGAA
AAACTGATCA TGTCCGGTGC ATTTGACCGT TTGGGGCCAC ACCGTGCAGC ATTGATGAGT
TCTCTCGGGG ATGCGCTTAA AGCCGCAGAT CAACATGCTA AAGCCGAAGC AATTGGTCAG
GTAGATATGT TTGGTGTATT AGCCGACGCG CCTGAGCAGG TTGAGCAATC CTATGCCAAT
GTGCCGCCAT GGCAGGAGCA GGTTGTTTTA GATGGTGAAC GGGAAACGCT GGGGCTGTAT
TTAACTGGCC ATCCGATCAC TCAGTACCTC AAGGAAATCG AACGCTATGC CGGTGGGATG
CGTTTGAAGG ATATGCATCC GACGGATCGG GGCAAAATGA CCACCGCAGT GGGGTTGGTG
ATCGCGGCAA GGGTTATGGT CACAAAACGT GGTAATCGCA TTGGTATTTG TACGCTAGAT
GACCGCTCTG GTCGTCTGGA GGTGATGTTA TTCACCGATG CATTGGAAAA ATATCAGCAT
TTATTGGAAA AAGACCGTAT CCTGATAGCC ACCGGACAGG TCAGCTTTGA TGACTTTAGT
GGTGGGCTTA AAATGACCGC CCGTGAGTTA ATGGACATCA GTGAAGCTCG TGAAAAATAT
GCCCGTGGGC TTGCTATCTC GCTGACTGAC AGGCAAATTG ATGACCAGCT TTTGAACCGT
CTCCGTCAGT CGTTGGAACC CCATCGAGCG GGGACGATCC CAGTACATCT TTATTACCAA
CGGGAAGATG CTCGCGCCCG GCTGCGGTTT GGAGCCACAT GGCGCGTGAC GCCCACCGAT
CGCTTATTAA TCGATTTGCG AACGTTGGTA GGTAATGAGC AAGTGGAACT GGAATTTGAC
TAA
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| Protein sequence | MAEPRFVHLR VHSDYSMIDG LAKIGPLVKR AAALGMPALA ITDFTNLCGL VKFYGSAHGA
GIKPIIGADF YVQSEILGDE LAHLTVLARN NEGYQNLTLL ISEAYQRGYG AAGPIIDRDW
LIKHKEGLIL LSGGRMGDVG KFLLRGNQVQ VDQCLAFYQE HFPDCYYLEL IRTGRPDEEN
YLHAAVALAT ERGLPVVATN DVRFIDESDF DAHEIRVAIH DGFTLVDPKR PKNYSPQQFM
RDEEQMCELF ADIPEALINS VEIAKRCNVT IRLGEYFLPQ FPTGEMSTED FLVEKAKQGL
EERLEFLFPD PEVRLQKRPE YDERLDIELK VINQMGFPGY FLIVMEFIQW SKDNGVPVGP
GRGSGAGSLV AYALKITDID PLEFDLLFER FLNPERVSMP DFDVDFCMEK RDLVIEHVAE
MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPLDPGMT LEKAFAAEPQ
LAEIYEADEE VRALIDMARK LEGVTRNAGK HAGGVVIAPT KITDFAPLYC DAEGNNPVTQ
FDKNDVEYAG LVKFDFLGLR TLTIINWALE MINARRAKTG LEPIDIASIP LEDKKSFDML
QRSETTAVFQ LESRGMKDLI KRLKPDCFED MIALVALFRP GPLQSGMVDN FIDRKHGREA
ISYPDIEWQH ESLKPVLEPT YGIILYQEQV MQIAQVLSGY SLGGADMLRR AMGKKNPAEM
AKQRSVFEDG AKNQGIDGEL AIKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKAHYPA
EFMAAVMTAD MDNTDKVVGL VDECWRMGLK ILPPDINSGL YHFHVNDDGE IVYGIGAIKG
VGEGPIEAIL EARKEGGYFK ELFDLCARVD TKKLNKRILE KLIMSGAFDR LGPHRAALMS
SLGDALKAAD QHAKAEAIGQ VDMFGVLADA PEQVEQSYAN VPPWQEQVVL DGERETLGLY
LTGHPITQYL KEIERYAGGM RLKDMHPTDR GKMTTAVGLV IAARVMVTKR GNRIGICTLD
DRSGRLEVML FTDALEKYQH LLEKDRILIA TGQVSFDDFS GGLKMTAREL MDISEAREKY
ARGLAISLTD RQIDDQLLNR LRQSLEPHRA GTIPVHLYYQ REDARARLRF GATWRVTPTD
RLLIDLRTLV GNEQVELEFD
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