Gene YpsIP31758_1027 details

Gene Information

• Locus tag: YpsIP31758_1027
• Symbol: rnhB
• ID: 5384433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1230433
• End bp: 1231029
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640864000
• Product: ribonuclease HII
• Protein accession: YP_001400011
• Protein GI: 153946846
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: 55
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGA CTTTTATTTA CCCACAGGCT AATTTAATCG CAGGCGTGGA TGAAGTGGGT 
CGTGGCCCTT TGGTGGGTGC CGTAGTCACT GCAGCGGTGA TCCTTGATCC TAACCGGCCA 
ATAGTTGGCT TGGCAGATTC AAAAAAACTC AGCGAGAAGC GCCGCCTGTC ACTGTATGAC 
GAAATCACTG AAAAGGCACT ATCATGGAGT CTTGGTCGTG CTGAACCGGA AGAAATTGAT 
CAGCTTAATA TTTTGCACGC AACCATGCTG GCGATGCAAA GGGCTGTATC GGGGCTGCAT 
ATTGTACCCG ATTATGTATT GATAGATGGT AACCGTTGCC CGAAATTACA GATGCCGTCA 
CTGGCCGTTG TCAAAGGAGA TAGCCGGGTG GCGGAGATCA GCGCGGCTTC TATTTTAGCC 
AAAGTGACGC GTGATCGTGA AATGACCGAG TTGGACCTCC TCTTCCCTGA ATATGGTTTC 
GCACAACATA AAGGCTACCC AACGGCTTTT CATTTGGAAA AGTTAGCCGC GCTTGGTGCC 
ACGGTACATC ATCGGCGCAG TTTTGGCCCG GTGAAACGGG TGCTGGGTTT GGTGTAA 

 

Protein sequence

MSETFIYPQA NLIAGVDEVG RGPLVGAVVT AAVILDPNRP IVGLADSKKL SEKRRLSLYD 
EITEKALSWS LGRAEPEEID QLNILHATML AMQRAVSGLH IVPDYVLIDG NRCPKLQMPS 
LAVVKGDSRV AEISAASILA KVTRDREMTE LDLLFPEYGF AQHKGYPTAF HLEKLAALGA 
TVHHRRSFGP VKRVLGLV