Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0946 |
Symbol | |
ID | 5384828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1131522 |
End bp | 1134596 |
Gene Length | 3075 bp |
Protein Length | 1024 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640863912 |
Product | polysaccharide lyase family protein 8 |
Protein accession | YP_001399930 |
Protein GI | 153948957 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAT TATTAGGTAC TGCGGCTTAC ACACCTCACC TTTCGGCCAA TAATACAAAA AGTGCGAAAA CAGAGGTAAG TCAAAAAGCG CTGATGCAAT CTTCGATTAT TGATTTCGAT GACAATCAGC TCCCTGATTT TGTCACCGCC AGTTCAGGTT CAACCTTATC GCTGAGCTCC ACCCGCTATA TTATGGGTCA ACAGTCGCTT AAATGGGAAT GGCAGGCAGG CAGTACCATG ACCATTGAGC ATCCTATTAC ACTGGTCACC GATAAGGTCG CCTCTAAAAC CTGGGGACGT AAAGCCACAC AGGTGCTCTC TTTTTGGATC TATAACGAAA CTCCGGTGGA TGATTATATG ATCGTCGATC TGGGGCGAGG GCTCGGTCCG TCAGGCGCAC CGGATGCCGG TATTAAAGTC AAAATGAATT TCAGTGGCTG GCGCACCGTG GGCGTGTCAC TGCAAAATGA TCTGGAAGGG CGAGAAATCG AAGGCATTGG TTTCGATGAT AATGCAGAAG GTGAAAGCGG TGGACGTAGC ACGATCGCCG GTGGTGCGAA AAGCGATATG GACAGCATCC GTTTTCGGGC ACCGCTAAAA GCACCAGCGG GTATCTTCTA TATTGATCGC GTTATGTTGT CTATTGATGA TGCTCGCTAT CAATGGTCAG ATGATCACGT CAAAACCCGT TATCAGATCC CGGAAATTAA TTTTCGCTTA CCCGCCAAAT TACCCGCACC AACGGCCGGG GAAATAGCGG CAGCTGATGA CATTCGTGGT GCATTGATCC GCGTCTTTAC CGAAGGTCAA GGTGGTGAGA ATGGCTTGGT TGTGGTCGAT AATCGCGAGA AATTACGCGC GCATTTTGCA GCATTAAAAA TTCAACGTGA TGCCGATGGG CAATTATCAG GTCGGCATAT TATTACAGAT AAACAGAAGG TGTTATATCA ACCAGAGTTT ATGGATGATA TTGATCAGCA GCGTTTCAGC GATTATGTGC TCTTGGGTGA TTACACCACA TTAATGTTCA ATATCAGCCG AGCCTATCAG CGCAGCACAT CCGAAGAGGT GCGTCAGGAA CTGGCTGACA TGTATATCCT GATGACTCAA CACCTGTTGG ATCAAGGTTA TATGGATGGT AGTGGGCTGG TGACAACCCA CCACTGGGGA TACAGCTCAC GCTGGTGGTA TATCTCAGCC ATGTTAATGG CAAACGAACT GGATAAGCAT CAACTACGTC AGCCAGTTTC CGATGCGCTG CTGTGGTATT CCCGTGAATT TAAAGCCAAC TTTGATATGG TTCCGGGGCC GGAAAGCTCG GATTTGGACT ATTTCAACAC CCTATCCCGT CAACATCTGG CGTTGCTGAT GCTGGAATCT GATCCAGCCA AACGCGTGGC ATTGCTTAAG CGTTTTGGTG AGTACATCAA TGTGGCACTT TCACAGACCC CACCGGGGGG CTACGACGGC TTGCGGCCAG ATGGTACGGC ATGGCGTCAT GAAGGCAACT ATCCAGGTTA CTCATTCCCT GCCTTTAAAA ATGCCGGCCA ATTAGTATAC ATGCTACATG GCACACCGTT TGCGGTGAGT GATGAAGGGC GAGCGGCCCT GAAAAAAGCC ATGTTATCGG CATGGGTCTA CAGTAACCCA GCAACCTCGT TGGGGCTGGC GGGCCGTCAT CCGTTTAACT CTTCAAGTGT GACTCTGTTC CAAGACGCCT TCCGCTGGTT GGCACTCACG GGGGATCCGA AAACCGGTGA TAAAGTGGAT AAAGCGCTGG CGGCCGCTTA TCTGCAAATT ACCGAAACAC CAGAAAGTGA GAGTGAAGCA ATCTTTGGTG TGCGCATTGC TCCAGCAGAG CTCCCCCAAG GAAACTGGAC ATTTAACGGC GGTGCATTCG GGATCCACCG CTTCAGCGAC AAGATGGTGA CGCTGAAGGC GTACAACAGC AATGTCTGGT CATCAGAGAT CTATTATCGT GATAACCGTT ATGGCCGTTA TCAGAGTCAT GGTGCAATAC AAGTACTCCC GTATGGTAAC CAGAAAGAGA TAGGTTTTGT ACAAGATGGC TGGGACTGGA ATCGCAATCC GGGCACAACC ACGATCCACC TTCCATTAGC TGAACTGGAT AGCCCGAATA CGCATACCCT GATGTTACGT GGTAATCATC CATTCAGTGG TCACTCATCA CTAAGTGGCA AATATGGCAT GTTTGCCTTT AAATTTGATG CGCCATCTAT GCCGAAGTTT GACAGCAGTT TTACCGCGCG TAAGAGTGCT CTCGAAACTG AAAATCGGTT AGTTCTCTTG GGCAGTAACA TCAGTAACAA TACGGGAAAA TATGCGACTG AAACCACTCT GTTCCAACAT GGCATTACAG ATAAAGCCAG TGATCTCTGG GTGAACGGCG AACGTATTAC GGCATTGCCT TACCAGCGCG CACTGGAGGA AGGTGATTGG TTAATTGATG GCCATGGTAA CGGCTATCTC CTGACCAAAG GGGCGAAAGG TGAAGTGCGC CGCCAGCATC AGGTTTCTGC CAATGATAAA TCCCGTGACC CTACTGAAGG CAATTTCAGT CTGGCCTGGC TTGATCACGG GGCGAAACCA CAGAATGCAC ACTACGAATA TCTGATGGTG CTAGAGGCAA CACCGGAAGG CATGCAACAA CTGGCCACAA ATTATCGGGC CGGTAAGAAA GTGTATGAAG TGTTACGTCA AGATGCCTCC GCACATATTG TGCGTGATAA CGTGACGCAG ACAACCGGTT ACGCTGCCTT TAGTTCTGTA ACACCAGATG AGGGTGTGGT GAAAAATATT GCTCAGCCAG CCATTGTTAT GACGCAAATG CAGAGTCATG GTCAGCTTAA GATCAGCGGC GTTACGCCAG ATCTGAATAT GACCCGCACA ACGAAAGCGA CGCCATTAGC GATTGCCGTG ACACTCAACG GCCAGTGGCA GGCCACGGAG AATAATCCGC AGGTGAGCGT AAAACCTGCG GGAGAGGCCA CGCAACTGGT GTTTACCAGC TACTTTGGTA TGCCACAAGA GGTCACGCTC AAGCCGATGA ACTAG
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Protein sequence | MTTLLGTAAY TPHLSANNTK SAKTEVSQKA LMQSSIIDFD DNQLPDFVTA SSGSTLSLSS TRYIMGQQSL KWEWQAGSTM TIEHPITLVT DKVASKTWGR KATQVLSFWI YNETPVDDYM IVDLGRGLGP SGAPDAGIKV KMNFSGWRTV GVSLQNDLEG REIEGIGFDD NAEGESGGRS TIAGGAKSDM DSIRFRAPLK APAGIFYIDR VMLSIDDARY QWSDDHVKTR YQIPEINFRL PAKLPAPTAG EIAAADDIRG ALIRVFTEGQ GGENGLVVVD NREKLRAHFA ALKIQRDADG QLSGRHIITD KQKVLYQPEF MDDIDQQRFS DYVLLGDYTT LMFNISRAYQ RSTSEEVRQE LADMYILMTQ HLLDQGYMDG SGLVTTHHWG YSSRWWYISA MLMANELDKH QLRQPVSDAL LWYSREFKAN FDMVPGPESS DLDYFNTLSR QHLALLMLES DPAKRVALLK RFGEYINVAL SQTPPGGYDG LRPDGTAWRH EGNYPGYSFP AFKNAGQLVY MLHGTPFAVS DEGRAALKKA MLSAWVYSNP ATSLGLAGRH PFNSSSVTLF QDAFRWLALT GDPKTGDKVD KALAAAYLQI TETPESESEA IFGVRIAPAE LPQGNWTFNG GAFGIHRFSD KMVTLKAYNS NVWSSEIYYR DNRYGRYQSH GAIQVLPYGN QKEIGFVQDG WDWNRNPGTT TIHLPLAELD SPNTHTLMLR GNHPFSGHSS LSGKYGMFAF KFDAPSMPKF DSSFTARKSA LETENRLVLL GSNISNNTGK YATETTLFQH GITDKASDLW VNGERITALP YQRALEEGDW LIDGHGNGYL LTKGAKGEVR RQHQVSANDK SRDPTEGNFS LAWLDHGAKP QNAHYEYLMV LEATPEGMQQ LATNYRAGKK VYEVLRQDAS AHIVRDNVTQ TTGYAAFSSV TPDEGVVKNI AQPAIVMTQM QSHGQLKISG VTPDLNMTRT TKATPLAIAV TLNGQWQATE NNPQVSVKPA GEATQLVFTS YFGMPQEVTL KPMN
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