| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0943 |
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| Symbol | agaR |
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| ID | 5388070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1127913 |
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| End bp | 1128689 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640863909 |
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| Product | transcriptional repressor AgaR |
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| Protein accession | YP_001399927 |
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| Protein GI | 153947733 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAGCGG CAATCGAAAG GCGCATGGAA ATCTTCAATA TAGTAACCCA GCAAGGGAAA
GCTCGTGTCG AAGATCTAGC CGAAAGATTC AATGTCTCAA GTGTCACCAT TCGTAGTGAC
CTGAGTTTTT TAGAGAAAAA CGGGTACATC GTCAGATCGC ACGGTTCGGC TATTCCGAAC
ACCGGCGTTA TCGCCGAGCT GACTGTCCAT GAAAAGCGGC GCCGTAATTC CGGCGTGAAA
TCGCTGATTG GTCAGGCGGC GGCGAAGCTG ATTAACAGTG GTGACACCGT CATTCTGGAT
TCAGGGACAA CCACACGGGA AATTGCGGCC AACTTGAGGT CGGTAGAGAA CGTAGTGGTT
ATGACGAATG GTCTTGATGT GGCTATGGAG TTAGCATCCG CTCCCGGCGT GGAAGTCCTC
ATCTCCGGTG GTGTGTTGCG TAAGAGTGCG ATGTCTTTTT CTGGTTCTCA AGCCGAAGCC
AGCCTGAAAA ACTTTCGTTT TGACAAAGTT TTTCTGGGTG TTGATGGTTT TGACTTGCGA
GTTGGTATCA CCACATATAA TGAGCAGGAA GCGAGTCTTA ACCGCCTAAT GTGTGACATC
TCGGAACAAA TTATTGCCGT TGCTGATTCG ACCAAGTTTG GGAAACGCAG CTGCCACATG
ATTCGAGAGT TTGGTGATAT CGATATTTTG GTGACGGATT CGGATATTCC TGAAGAGTAT
GTGCAGCGAC TACGGGATAT GCGAATTGAA GTGATCATAG CTGAAAAAGA GAAATAA
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| Protein sequence | MKAAIERRME IFNIVTQQGK ARVEDLAERF NVSSVTIRSD LSFLEKNGYI VRSHGSAIPN
TGVIAELTVH EKRRRNSGVK SLIGQAAAKL INSGDTVILD SGTTTREIAA NLRSVENVVV
MTNGLDVAME LASAPGVEVL ISGGVLRKSA MSFSGSQAEA SLKNFRFDKV FLGVDGFDLR
VGITTYNEQE ASLNRLMCDI SEQIIAVADS TKFGKRSCHM IREFGDIDIL VTDSDIPEEY
VQRLRDMRIE VIIAEKEK
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