| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0837 |
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| Symbol | rsmE |
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| ID | 5387977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1014734 |
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| End bp | 1015465 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640863801 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001399821 |
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| Protein GI | 153949952 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATAC CCCGCATTTA CCACCCACAG CCCTTGCAGG CCAATACCGA ACTGGCGCTC
ACTGATGAAG CCGCAAATCA TGTCGGCCGC GTACTACGGA TGACTGAAGG GCAAAGCCTG
CAATTATTTG ACGGCAGTAA TCAGATTTTT GACGCTGAAA TTATACGGGC AGATAAAAAG
AATCTGATTG TCCGACTCGC TGAAGGGCAA TGGGAAGATC GGGAATCCCC TCTGAATTTA
CATTTAGGGC AGGTTATTTC TCGTGGGGAA AAAATGGAGT TTACCGTCCA GAAATCTATT
GAACTGGGCG TTAATGTGAT TACCCCGCTG TTTTCAGCAC GTTGTGGCGT TAAGCTTGAT
GGCGAGCGTC TGACGAAAAA AATTCAACAG TGGCAAAAAA TTGCTATCGC CGCCTGCGAA
CAATGTGGCC GCAATACGAT CCCAGAGATC CGCGATGCCA TGCAACTTGC TGATTGGTGT
GCTGAATCCG ATGACAGCTT GAAACTGAAT CTGCACCCAC GTGCTAGCAA CAGTATTAAT
ACCCTCCCTT CCTCACTCAA CAAAGTGCGT TTGCTGATTG GCCCAGAAGG TGGCCTCTCT
GCTGATGAAA TTGCGATGAC CTCGCGCCTC GGATTTACGG ATATCCTGCT GGGGCCACGA
GTGCTGCGAA CAGAAACTAC CGCCCTTACC GCAATTACTG CGTTGCAGGT GCGGTTTGGC
GATCTGGGAT AA
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| Protein sequence | MRIPRIYHPQ PLQANTELAL TDEAANHVGR VLRMTEGQSL QLFDGSNQIF DAEIIRADKK
NLIVRLAEGQ WEDRESPLNL HLGQVISRGE KMEFTVQKSI ELGVNVITPL FSARCGVKLD
GERLTKKIQQ WQKIAIAACE QCGRNTIPEI RDAMQLADWC AESDDSLKLN LHPRASNSIN
TLPSSLNKVR LLIGPEGGLS ADEIAMTSRL GFTDILLGPR VLRTETTALT AITALQVRFG
DLG
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