Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0815 |
Symbol | |
ID | 5386913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 984781 |
End bp | 986925 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640863779 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001399799 |
Protein GI | 153949515 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TAAACATGTT CATGCTATCC ACGTTCATGC GATCCATGTT CATGCGATCT ACGTTGATAC CCTCTACGTT CATACTGTCC ACACTACTGC TGCCGGCTGT CGTGTTGGCA GAAGATACGA TAATCGTTGA GAGAAATAGA TCGCAAACTG ATAGCTATCA AGCGACCACC AGCGTGACAG CCAATCGATC GCCAGCCAAC ATTATCGATA CCCCGCAAAA CGTGACTGTC GTGACACATC CGGTGTTGGA AGATTATGAT GTGACCAATC TTGGCGAGGC GCTTTATTTT GTCAGCGGGA TTACCCAATC CAACACGCTG GGTGGCACGC AAGATGCGCT GATTAAGCGC GGTTTCGGCA ATAACCGTGA CGGCTCAATT CTGCACGATG GCATACGCTC AATTCAGGCA CGTAACTTCA CGCCCACCAG CGAACGCGTC GAGGTGCTGA AAGGCCCCTC CTCCATGCTA TACGGTATGA ATGAACCGGG TGGGCTGATC AATGTGATCA GCAAAAAGCC ACAACTCGAT CCCCATGTGC ATTTGGAAGC CAACGCCAGT AGTTTCAAGG GTGGCGGTGG CCAACTTGAT GTAACCGGCC CCTTGGGGGA ATCCGGCTTT GCCGGGAGGC TGATTATCGA TCATCAGGAG ACCGATTACT GGCGTAACTT TGGCCGTAAC CGCCAGACTG TGGTCGCGCC ATCGCTTGAC TGGTACGGTG AAAACACCAC CGTACACCTC GCTTGGGAAC GAATGGAGTA TTTGGTACCG TTCGACCGTG GCACGGTGAT TGACCCACGC ACTGGCAAAC CCGTCGACAC GCCGCGTGAT CGCCGTTTCG ACGAGAGCTA TAACGCCACC CGCGGCGATC AAGACACCGT CACGTTTAGC ATCAACCACG ATCTGAACGA GTTCTGGTCC ACACAGCTAA ATTATGCTTT CAGCCGCAAT AGCTATAGTG ATAATCAGGC GCGCGCCACT GCATTTAACG CTGAAACCGG CGTATTGACC CGCCAGTCGG ACGCCACCGC TAACGCCAAG AGCCATTCGC AGGCGGTGCA GTGGGTAGTC AATGGTGATC TCGATTGGGG TTTCACTCAT CACCAACTGA TGTTTGGTAT CGATTATGAA GCCCGCCGCG TTTTCCGTGG CGACATGATA CGCGGCAGCA AAAACAACGG GTTTAATGTC TATGACCCAA TTTATGGCAC TCTGCCCCCA TCCACAGCCG TCAGTGCTGC TGATAGCGAT CAGCGGGAAA ATATCGATAG CCGCGCGCTG TTCATTCAAG ACTCGATGCG CCTAAACGAG CACTGGCTAT TGCTCGGTGG CTTGCGCTAC GACAGCTTCG ATGTGATGGC CGGTAAAGGC CGCCCATTCA AAAAGAATAC CGACAGTTCC GATAGCCGCT TAGTGCCGCG CGCCGGGGTG GTTTACAACC TGAACGACTG GTCAAGCCTA TACGTCAGCT ACACCGAGTC CTTTAAACCG AATGTCTCTA TCGCCACCGC CATTGATGCG TTACCCCCCG AATACGGTAA ATCGTGGGAG GCGGGCTACA AAATTGATAT CAACAACCGT GTAACCGGTA CACTCGCGGT CTACGATATC CATAAACGTA ACATTATGGT CAGCGAGCTG GTAGACGGCG AAACAGTCAC ACGTACCGCC GGTAAGGCGC GTTCACGCGG CCTGGAACTG GATATGGCTG GCAAAGTGAC CGACTCACTG AGTCTCATTG GCAGCTATGC CTATACCGAT GCACGCCTGA CTGAAGACCC GGATAACAAT GGTAACGACC TACCCAACGT GGCACGCCAC ACTGCGGCAC TGTTTCTGAG CCGGGACTTC GGCAGCACGT CATTGATTTC AGGCGATGAA GTGAAAGCAG GTATTGGCAC ACGCTATGTC GGGAAACGTG CTGGCGACGC CGCCAACAGT TTCTGGCTAG ATAACTACAC CGTAGCGGAC GCGTTTGTCG CCTGGAAGAT GCCGCTCTCC GGCTATCAAC TCAAATGGCA GCTTAATGTG AAAAACCTGT TCGATAAGAC GTACTATCCG TCGAGCGCTA ACAACCTGCG TATCGCTATC GGCGAACCAC GTCAGGTTGT GTTGCAGGGC AGTATCGATT TCTAA
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Protein sequence | MNKINMFMLS TFMRSMFMRS TLIPSTFILS TLLLPAVVLA EDTIIVERNR SQTDSYQATT SVTANRSPAN IIDTPQNVTV VTHPVLEDYD VTNLGEALYF VSGITQSNTL GGTQDALIKR GFGNNRDGSI LHDGIRSIQA RNFTPTSERV EVLKGPSSML YGMNEPGGLI NVISKKPQLD PHVHLEANAS SFKGGGGQLD VTGPLGESGF AGRLIIDHQE TDYWRNFGRN RQTVVAPSLD WYGENTTVHL AWERMEYLVP FDRGTVIDPR TGKPVDTPRD RRFDESYNAT RGDQDTVTFS INHDLNEFWS TQLNYAFSRN SYSDNQARAT AFNAETGVLT RQSDATANAK SHSQAVQWVV NGDLDWGFTH HQLMFGIDYE ARRVFRGDMI RGSKNNGFNV YDPIYGTLPP STAVSAADSD QRENIDSRAL FIQDSMRLNE HWLLLGGLRY DSFDVMAGKG RPFKKNTDSS DSRLVPRAGV VYNLNDWSSL YVSYTESFKP NVSIATAIDA LPPEYGKSWE AGYKIDINNR VTGTLAVYDI HKRNIMVSEL VDGETVTRTA GKARSRGLEL DMAGKVTDSL SLIGSYAYTD ARLTEDPDNN GNDLPNVARH TAALFLSRDF GSTSLISGDE VKAGIGTRYV GKRAGDAANS FWLDNYTVAD AFVAWKMPLS GYQLKWQLNV KNLFDKTYYP SSANNLRIAI GEPRQVVLQG SIDF
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