Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0812 |
Symbol | |
ID | 5385296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 981070 |
End bp | 982029 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863776 |
Product | sugar ABC transporter, periplasmic sugar-binding protein |
Protein accession | YP_001399796 |
Protein GI | 153947296 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA GACTAATTGG CCTGCTGTTG GCCGGTGTCA CCATCTCAAT GAGTGCCTCT GCCGCAGAGC CACTCAAGAT CGGCTTCGCT AACCGTACCT TGAATGGCGC TTTCTTTAAT GGGCTGACCG AATACATGAA GATTCATGCT AAGGAGAAAG GCTATACATT AATTACCACC GATGCCCGCG GCGATTTGAA TAAGCAAATT GCTGATGTGG AGGACATGCT GTCACAGGGG ATTAATTATC TGATACTCAA TCCGCAAGAT CCCCAAGCGG GTTTGCGCAT TACTGAAATT GCCAAGCGGG CTGGTGTACC TACTGTGATC CTCGATAGCG ATATCGCACT TGAAGCTCCG GTTATCACGC GAGTTCAGGC CAATAATGCC AAAAATAACA ACCTGATCGG CGAATATGCG GTGGGCCAGT TTGGCGACAA ACCGATGAAC TGCATATTTC TCAGTGGTAA CCAAGGTAAT TTGGTCGGCC AGGCGCGCCG TGACAACTTC CTGCTGGGGG TTGCTGAAGC GCAGTTACGT AAATACAACC GCACTAATGT GAACTTTCTT AGCCAAGGAT GGGGGAATTG GGATCAGCAG GGCGGTTTGA AAGCTATGGA AGATATTATT GTGGCGCAGG GCGATAAAAT TAACTGTGTT TACAGTGAAA TGGACGATAT GGCGTTAGGT GCCATCCGTG CGCTGAAAGC GGCTAACAAG CTGGATAATG TCAAAGTGTA TGCTCACGAC GGGTATAAAA AGGGGCTGGA AGCCGTGAAA AAAGGCGAAC TGCAGGCGAC GGCCTCGAAT AACCCAGACT TGCTGACTCG CACGGTGCTA GAGGTTATTG GTCAATATCA GGCCGGTCAG ACGAGTTTTC CTGATTATGT CTATATCCCC TCCATTCTGA TCACGAAAGA TAACGTCGAC AAATATTATA AAGAAGATTC GATTTTCTAA
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Protein sequence | MKKRLIGLLL AGVTISMSAS AAEPLKIGFA NRTLNGAFFN GLTEYMKIHA KEKGYTLITT DARGDLNKQI ADVEDMLSQG INYLILNPQD PQAGLRITEI AKRAGVPTVI LDSDIALEAP VITRVQANNA KNNNLIGEYA VGQFGDKPMN CIFLSGNQGN LVGQARRDNF LLGVAEAQLR KYNRTNVNFL SQGWGNWDQQ GGLKAMEDII VAQGDKINCV YSEMDDMALG AIRALKAANK LDNVKVYAHD GYKKGLEAVK KGELQATASN NPDLLTRTVL EVIGQYQAGQ TSFPDYVYIP SILITKDNVD KYYKEDSIF
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