Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0796 |
Symbol | |
ID | 5385509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 958005 |
End bp | 959609 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640863759 |
Product | ImpA domain-containing protein |
Protein accession | YP_001399780 |
Protein GI | 153949179 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACGT TAAATACCCT GATCACTGCC TGTGCCGCTG TCCCTGATTC ACTGTTATTA AAGGCAGAAC AACAGGTTAC ACTTTGGGAT CGCTGGTTGC AGCCGGTGAC GACTGAACAG CACAGCGGAG AAGACCTCAG TTACAATGAT GACTTCCAGC AGATGCGTGA AGAGGTCAAT AAGCTCTCGG GTGCTGATAC CACGTTAGCC AGCGAGCTGG CAGAAAAACT GTTAACCCTG CATGGCAAAG ATGTGCGGGT GGCAACCTAT TACATTTGGG CGCGTTTACA CCGTGATGGC GAGGCTGGGC TGGCGGATGG ACTGGCACTG CTGGCCGGGC TTATCAGCCG TTTTGGTGAA ACCCTGCATC CGTTGCGCGC AGCCAGTCGG AAAACTGCGC TGGAATGGCT ATCGAGTTCT CGCGTGCTGG ACAGTTTGTC GCTCTATCCT GAAGTGGATA ATGCGGATTT TGAACGCATC GTTGGCGCAC TGGCGTTAAT CGAACAGAGC CTCAGCGGCT GGGATGACGC ATCCCGTCCG CAGTTTGGTG GATTGTATCT TGCCTTGGAA CATCGTCTGG CGCAGTCCGG TGGACCGAAT GCGGTGGTGC CACAAAACAG CAGCGGGTCA TCATCGGCAG GGAGTCAGGG CCAGACGGCT ATGGTTTCAC CGGAGTTGCG GCCAGTCCAG TCGGGGCGTG ACCTGCTCGA CCAGGCTAAA ACGTTAGCAA AATACCTGCG GAACCAGCCG CAGGGATGGC TCTCCGGGCA TCATCTTATC AAGAGCGTGC GCTGGGATAC GGTACACCAG TCACCGCCGT TGGATGTGAG TGGACGAACC CGACTGGTAC CGCCGCGCCC GGAATATCGC GTGCTGCTTA AGCGTCTTTA TCTGCAACAA AACTGGCTGG AGTTGTTGGA ACAGGCGGAA TCGATATTTG CCGAAGGGGT CAACCATTTC TGGCTCGATG TGCAGTGGTA TCTGCATCAG GCACTCAGTA AAGCGGGAGC CCCATTCGAT GGCTGGGCAG CTTGTATCAC CCAGGATTTA CGTCTGTTAC TGACCCGGCT GCCCGGTCTG GAGGGGCTAT GCTGGAGTGA CGGCACGCCG TTTGCCGATG AGGTGACGCT GGGGTGGATA AACCAGCAGG TGCTGGAGTC GGTGTCGGGC TGGGGCAGCG AGCCTGCCGC CGTGATGGCA TCGGGCGAAG ATGACATTCT GTTGCTGGAG CCAGAAGCTC TGGCTCAGGC GGACAGTGAA GGGATTGAAG CCGCACTTAA CTGGTTGCAA TCCCGTCCGG GTATTACCAC TGCCCGCCAT CAGTGGCTGC TGCGTTTGGT GATGGCCCGC GTGGCGGAGC AGTACGGCAA GAACGATATG GCACTGCATC TGCTTAGTGA ACTTGATAGC CGCGGTGCAT TGCTAACCTT GCCGCAGTGG GAGCCGGGGC TGGCGTTTGA AGTCAAAGCC CGAAGTCTGA AGCTGCTGCG GATGAAAGCA CAACGCAGCG ACAGTGAAAA AACCCGCCTG CATATCGAAA TGGAAAGCTT GCTCAGTGGG CTTATGGCCC TCGACCCGGC CCGTGCGGCC GTATTATGCG GATAA
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Protein sequence | MATLNTLITA CAAVPDSLLL KAEQQVTLWD RWLQPVTTEQ HSGEDLSYND DFQQMREEVN KLSGADTTLA SELAEKLLTL HGKDVRVATY YIWARLHRDG EAGLADGLAL LAGLISRFGE TLHPLRAASR KTALEWLSSS RVLDSLSLYP EVDNADFERI VGALALIEQS LSGWDDASRP QFGGLYLALE HRLAQSGGPN AVVPQNSSGS SSAGSQGQTA MVSPELRPVQ SGRDLLDQAK TLAKYLRNQP QGWLSGHHLI KSVRWDTVHQ SPPLDVSGRT RLVPPRPEYR VLLKRLYLQQ NWLELLEQAE SIFAEGVNHF WLDVQWYLHQ ALSKAGAPFD GWAACITQDL RLLLTRLPGL EGLCWSDGTP FADEVTLGWI NQQVLESVSG WGSEPAAVMA SGEDDILLLE PEALAQADSE GIEAALNWLQ SRPGITTARH QWLLRLVMAR VAEQYGKNDM ALHLLSELDS RGALLTLPQW EPGLAFEVKA RSLKLLRMKA QRSDSEKTRL HIEMESLLSG LMALDPARAA VLCG
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