Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0727 |
Symbol | |
ID | 5386760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 888186 |
End bp | 889736 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640863695 |
Product | hypothetical protein |
Protein accession | YP_001399716 |
Protein GI | 153947791 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATGT CTGTACAGGA AAACCGTGCG CAGGGTACTG CGACGACCGT ATTAAAGAAT AGCCCTGCGG CACAAGGGGT TTACGCCGCC TTGTTTGAAA AAATCAACCT GAGCCCGGTC TCCTCACTGG CCGGTATCGA GGCGTTCCAG AACAACGATG CGCTGGCGGA AGCCACCACC GATGAGCGCG TTACCGCCGC CGTCAGTGTC TTTTTAGACC TGCTGAAGCA GTCGGCGAAG AAAGTAGAAA AACTGGATAA AACCCTGCTG GACGGCCATA TTGCCGCACT GGATGACCAA ATCAGCCGCC AGTTGGACGC GGTAATGCAC CACCCCGATT TCCAGCGGGT GGAATCGACC TGGCGTGGTG TGAAGTCGCT GATCGATCAG ACCGATTTCC GCCAGAACGT GCGCATCGAG CTGCTGGATA TCAGTAAAGA TCATCTGGTG CAGGATTTTG AAGATGCCCC AGAAATTTCA CAAAGCGGTT TATACGCCCA GACCTATATT CAGGAATACG ACACCCCCGG CGGTGAACCG ATTGCTGCGG CTATCTCCAA CTACGAGTTT GACCGTGGCC CGCAGGATAT CGCCTTATTG CGCAATATCT CCAAGGTAGC CGCGGCGGCC CATATGCCGT TTATCGGCTC AGTGGGTCCG GCGTTCTTTG GTAAAGAGAA CATGGAAGAG GTGGCGGCCA TCAAAGATAT CGGCAACTAC TTTGACCGTG CCGAATACAT CAAATGGAAA GCTTTCCGCG ACTCGGATGA TTCCCGCTAT ATCGGCCTGA CCATGCCGCG CGTACTGGGG CGTTTGCCTT ATGGGCCAGA CACCGTGCCG GTGCGCAGCT TTAACTACGT AGAGCAGGTG AAAGGGCCGG ATCATGAGCG TTATCTGTGG ACCAACGCTT CGTTTGCCTT TGCTGCCAAC ATGGTGAAAA GCTTCATTAA AAATGGCTGG TGTGTGCAGA TCCGTGGCCC GCAGGCCGGT GGTGCCGTCA CCAACTTACC GATCCACCTG TACGATCTGG GTACCGGTAA TCAGGTCAAA ATTCCGTCAG AAGTGATGAT CCCGGAAACC CGCGAGTTCG AGTTTGCCAA TCTGGGCTTT ATCCCGCTGT CGTACTACAA AAACCGCGAT TACTCGTGCT TCTTCTCGGC CAACTCGGCG CAGAAACCGG CGCTGTATGA CACCGCGGAT GCCACGGCCA ACAGCCGCAT CAACGCCCGT TTGCCGTATA TCTTCCTGCT GTCGCGCATT GCCCATTATC TGAAACTGAT CCAGCGCGAG AACATCGGCA CCACCAAAGA TCGCCGTCTG CTGGAGCTGG AGCTGAACAA CTGGGTGCGC GGGCTGGTGA CGGAAATGAC TGATCCGGGT GATGATTTGC AGGCGTCCCA TCCCCTGCGT GATGCCAAAG TGACGGTCGA AGATATCGAA GACAACCCCG GCTTCTTCCG CGTCAAGCTG TATGCGGTAC CGCATTTCCA GGTGGAAGGG ATGGACGTCA ATCTGTCATT GGTTTCCCAA ATGCCAAAGG CTAAGGCATA A
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Protein sequence | MLMSVQENRA QGTATTVLKN SPAAQGVYAA LFEKINLSPV SSLAGIEAFQ NNDALAEATT DERVTAAVSV FLDLLKQSAK KVEKLDKTLL DGHIAALDDQ ISRQLDAVMH HPDFQRVEST WRGVKSLIDQ TDFRQNVRIE LLDISKDHLV QDFEDAPEIS QSGLYAQTYI QEYDTPGGEP IAAAISNYEF DRGPQDIALL RNISKVAAAA HMPFIGSVGP AFFGKENMEE VAAIKDIGNY FDRAEYIKWK AFRDSDDSRY IGLTMPRVLG RLPYGPDTVP VRSFNYVEQV KGPDHERYLW TNASFAFAAN MVKSFIKNGW CVQIRGPQAG GAVTNLPIHL YDLGTGNQVK IPSEVMIPET REFEFANLGF IPLSYYKNRD YSCFFSANSA QKPALYDTAD ATANSRINAR LPYIFLLSRI AHYLKLIQRE NIGTTKDRRL LELELNNWVR GLVTEMTDPG DDLQASHPLR DAKVTVEDIE DNPGFFRVKL YAVPHFQVEG MDVNLSLVSQ MPKAKA
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