Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0718 |
Symbol | |
ID | 5388533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 879419 |
End bp | 880777 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640863686 |
Product | hypothetical protein |
Protein accession | YP_001399707 |
Protein GI | 153946876 |
COG category | [R] General function prediction only |
COG ID | [COG4099] Predicted peptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTAACAC GCCGGAAATT TTTGATGATG AGTGCCGGAG CAGGTCTTTT ACTCTCTGTA CCCATGTTGG CTCGAACCGG TGTTCAGCCT GCACAAGCTG CCACCGCCAT TACGCAAGTT TTTGGTGACG GGATCCGGCT AACCGCTGTT GCGGTCGAAT ATCCGACAGA AGTCAGCGCT GAAGGGCTAA ACCCCGCCGA CTTTCATGTT GAAGGGCGAA CAGTAACCGG TGTATGGACC AGCACTTCTA CTAATCCGGC AGATATAGCG CCCTCAGGAC GCTATATGAT TATAGCGCTG TCACCTGATG ACAAGAATGC AACGCTGGCC GAACAGGTGC AGCCAAATAG TAAAAACAAC AGCAACAAAT CTGCCAATGG AAGAGGCGGC CCCGGTAATG CAGGCGATAT TCCTGCCTAT GATACGGTTT ACCGGACAGC TCAAGCCACG GTACTGCGCC TTCCGTCAGT TCATACCGCC AGTGGTGATA CGCTTCCCGC TAGCGAGAAA GCGTTGACAA CCCAATATGT GGAAAACTTG ATCGTTGATG ATTTTCAGCA GCTTGAGTTT TATGATGAAA AAACAGGTAA AAAGCTGAAA TACAATCTTT TCATCCCCAA AGACTATAGC CCTGATAAAA ACTATAGCCC TGATAAGGCT TGGCCGCTGG TGTTATTCAT GCATGATGCT GGCGCCACCA GCGATGTTAC ACGCACCACC CTGTATCAAG GCTTAGGCGC TATTGCTTGG GCAAGCCCAG AAGATCAGGC ACAGCGCCCC TGCTTTGTTC TTGCACCTCA GTATGAAGAA ATCATTGCCG ATGATGACTC AAAAACATCT GACATGCTGG ACACCACCAT TGATCTTATC AATGTACTTT CAGAGCAGTA CAACATTGAT AAGAGCCGTA TCTATGCCAC AGGGCAGTCG GGTGGATGCA TGATGACGAT AGCGATGAAC ATCAAGTATC CGGATTTCTT CGCGGCCTCT TTTTTGGTTG CGGGTCAGTG GGATCCCGCG TTGGTGAAAC CTCTTGCCCA GCAAAAACTC TGGATTCTGG TTTCTCAGGA CGATAACAAA GCCTGGCCAG GTCAAAATGC CATCATTGAT GTTCTGGAAA AAGAGGGTGT CCAAATCAGC CGTGCAATAT GGGACGGAAC ATGGAATGAA GAGCAATTTC GTCAGGCTTT TGAACAAATA GAGGCAGAAA AAAGCCCGAT TAACTATGTG GCATTTCGTG AAGGCACCGT GATTCCTGAG GGGCAATCCA CCGAAGGTGC CAGCGGGCAT CGCAATACCT GGCGAATTGC CTATACCATC TCCCCCATAC GCGAATGGAT TTTCAGGCAA CAGCGCTAG
|
Protein sequence | MLTRRKFLMM SAGAGLLLSV PMLARTGVQP AQAATAITQV FGDGIRLTAV AVEYPTEVSA EGLNPADFHV EGRTVTGVWT STSTNPADIA PSGRYMIIAL SPDDKNATLA EQVQPNSKNN SNKSANGRGG PGNAGDIPAY DTVYRTAQAT VLRLPSVHTA SGDTLPASEK ALTTQYVENL IVDDFQQLEF YDEKTGKKLK YNLFIPKDYS PDKNYSPDKA WPLVLFMHDA GATSDVTRTT LYQGLGAIAW ASPEDQAQRP CFVLAPQYEE IIADDDSKTS DMLDTTIDLI NVLSEQYNID KSRIYATGQS GGCMMTIAMN IKYPDFFAAS FLVAGQWDPA LVKPLAQQKL WILVSQDDNK AWPGQNAIID VLEKEGVQIS RAIWDGTWNE EQFRQAFEQI EAEKSPINYV AFREGTVIPE GQSTEGASGH RNTWRIAYTI SPIREWIFRQ QR
|
| |