| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0710 |
|---|
| Symbol | |
|---|
| ID | 5385711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 868514 |
|---|
| End bp | 870694 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640863678 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001399699 |
|---|
| Protein GI | 153948371 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACA AACACCTCTG GGTATTAAAT CCGTGTCTGC TGGTCATGCT CACACCAGCG
GCGTGGGCAG AGGATCAACT TGTGGTTTCA GCCAACCGCT CACACCGCAG CGTGGCAGAA
ATGGCGCAAA CAACTTGGGT GATTGAAGGC CAGGAACTTG AACAACAAGT TCAAGGCGGC
CTGGAAATCA AAGACATCTT GGCTCAATTG ATCCCAGGTA TCGACGTCAG CAGCCAAGGC
CGTACTAACT ACGGCATGAA CATGCGTGGC CGCTCAATCA TGGTGATGAT CGACGGCGTG
CGGCTGAACT CTTCACGTAG CGACAGCCGC CAACTCGATT CGATCGATCC GTTTAATATT
GCACACATTG AAGTCATCTC CGGTGCGACG TCACTTTATG GCGGGGGTAG CACAGGGGGC
TTGATCAATA TCGTGACCAA AAAAGGCCAG GAAGGAAAAC AGGTTGAGTT GCAAATTGGC
GGCAAAACCG GCTTTAACAG CCATAACGAC CACGATGAGA ACATCTCGGC CGCCATGAGT
GGGGGGACTG AGCGCGCATT CGGCCGATTC TCTGTTTCTT ATCAACGTTA TGGGGGGTGG
TACGACGGCA AAGGCAATGA GGTTTTGATC GACAACACCC AGACCGGCTT GCAATATTCT
AACCGTCTGG ACGTGATGGG CACGGGAACC CTCAATATCG ACGAAAACCA GCAATTGCAG
CTAACCACTC AGTATTTCAA CAGCGAATCC GATGGCAAAC ACGGCTTGTA TCTGGGGCAA
AACTTCTCAG CAGTAACGGG TACCGGGCAG GCCTCCAACA GCGCAGCGCT AAATTCAGAC
CGTATTCCGG GTACCGAACG CCATCTCATC AACTTGCAAT ACTCCAACAC GGATTTCTGG
GGGCAGGATT TAGTGGCGCA AGTGTATTAC CGTGATGAAT CACTAACCTT CTACCCATTC
CCAACACTGA AAGATGGCAA GGTGAGCACT ATCGGTGCAT CACAGCAAAA AACCGATTTC
TACGGCAGTA AACTGACATT GAACAGTGAA CCTATCGATA GCCTAACACT GACTTACGGT
ATCGATTTGG AACATGAAAG TTTCAATGCC AATCAACAGT TCTTTAATCT GGCGAAGGCA
CAGCAATCCG GCGGCATGAC GTTAGAAAAT GCCTACAACG TTGGCCGTTA CCCAAGTTAT
ACCACCACCA ACCTGGCTCC CTTCTTACAA ACCCGCTATG ACATCAACCC GATTTTCACT
CTGAGCGGCG GTGTGCGTTA CCAGTACACA GAGAACAAGG TTGATGATTT TGTGGGTTAC
GCACAACAAC AAGCGATTGC CAGCGGCTCC GCGACTTCCG CTGATCCCGT ACCTGGTGGG
AAAACGGATT ACAACAACTT CCTGTTCAAT GCCGGTTTAC TGGCGCACCT GACAGAAAGC
CAGCAGACCT GGTTCAACTT TTCACAAGGA TTTGAGATCC CGGATCTGGC GAAATATTAC
GGTTCTGGCT CCTACACGCT GGTTAACGGT CACTATCAGT TGCAAAACAG TGTCAACGTG
AATGACTCCA AACTGGAGGG CATCAAGGTT GATTCCTATG AGCTGGGCTG GCGCTATACC
GGTGATAACC TGCGCACCCA AATGGCGGGT TATTACTCGC TTTCTGATCA GACTATCTCG
ATCAACAAAA CAGACATGAC CATCAATGTG TTACCGGATA AGCGCCGAAT CTATGGGGTA
GAAGGCGCAG TAGATTACTT CTTCGATAAC AGCGAATGGA GTGCCGGTGC AACATTTAAC
CTAATTAAGT CGGAAACTAA GGTTAGCGGT AAGTGGCAGA AACTGACTAT CGATGCTGCC
AGCCCGTCGA AAGCCACCGC CTACATTGGC TGGGCACCGG GTGATTGGAA TCTGCGCGTG
CAATCCCAAC AAACGTTCGA TGTTTCCGAC AGCAAGGGTG ACAAAATAGA CGGTTACAAC
ACCATCGATT TTCTCAGTAG CTACGCCCTA CCCGTGGGAA AACTCAGTTT CAGTATCGAA
AACTTGCTGG ACAAAGAGTA CACCACCGTT TGGGGTCAGC GCGCACCGAT TCTGTATAGC
CCAACCTACG GCTCACCCAA CTTATACAGC TATAAGGGCC GTGGCCGGAC TTTTGGTGTG
AACTACTCAG TGTTGTTCTG A
|
|---|
| Protein sequence | MKHKHLWVLN PCLLVMLTPA AWAEDQLVVS ANRSHRSVAE MAQTTWVIEG QELEQQVQGG
LEIKDILAQL IPGIDVSSQG RTNYGMNMRG RSIMVMIDGV RLNSSRSDSR QLDSIDPFNI
AHIEVISGAT SLYGGGSTGG LINIVTKKGQ EGKQVELQIG GKTGFNSHND HDENISAAMS
GGTERAFGRF SVSYQRYGGW YDGKGNEVLI DNTQTGLQYS NRLDVMGTGT LNIDENQQLQ
LTTQYFNSES DGKHGLYLGQ NFSAVTGTGQ ASNSAALNSD RIPGTERHLI NLQYSNTDFW
GQDLVAQVYY RDESLTFYPF PTLKDGKVST IGASQQKTDF YGSKLTLNSE PIDSLTLTYG
IDLEHESFNA NQQFFNLAKA QQSGGMTLEN AYNVGRYPSY TTTNLAPFLQ TRYDINPIFT
LSGGVRYQYT ENKVDDFVGY AQQQAIASGS ATSADPVPGG KTDYNNFLFN AGLLAHLTES
QQTWFNFSQG FEIPDLAKYY GSGSYTLVNG HYQLQNSVNV NDSKLEGIKV DSYELGWRYT
GDNLRTQMAG YYSLSDQTIS INKTDMTINV LPDKRRIYGV EGAVDYFFDN SEWSAGATFN
LIKSETKVSG KWQKLTIDAA SPSKATAYIG WAPGDWNLRV QSQQTFDVSD SKGDKIDGYN
TIDFLSSYAL PVGKLSFSIE NLLDKEYTTV WGQRAPILYS PTYGSPNLYS YKGRGRTFGV
NYSVLF
|
|---|
| |