| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0624 |
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| Symbol | fliR2 |
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| ID | 5387888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 736275 |
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| End bp | 737048 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640863595 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_001399616 |
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| Protein GI | 153947704 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAATCG ATATTCATGC CATGACGGCT CCGCTCTTCG CACTCTGGCT ACCTTTTGTC
AGAATTTTGT CGTTTTTGCA TTTTTGTCCG GTTATTCGGC ATAAGGCCTT TACCCGCAAA
GCCAAGATTG GCACCGCGCT GTTACTGGCT ATCTTGATAA CCCCAATGAT CAGCCAACCG
GTGGTATCCA GGGAATTGCT CTCGATTGAA AGCCTCTTAT TGGCCGGTGA ACAAATCCTG
TGGGGCTGGT TATTTGGCTC CATGTTGCAT TTGGTGTTGG CCGCATTAGA GGCCGCGGGT
CAGATTCTAT CGATGAATAT GGGCCTGGGT ATGGCAATGA TGAATGACCC CACCAGCGGA
GCATCGACGG CGGTTATCTC ACAAATAATC TTTACTTTCA GTGTGTTGAT TTTTTTTACC
CTTGATGGCC ACTTACTGTT TGTCACCATT GTGTTGAAAA GTTTCAGTAG CTGGCCTATC
GGCGAAGCCA TCAATGATTT TTCGCTACGC TCATTGGCAT TAAGTCTTGG ATGGATTATC
TCATCGGCTA CCCTGCTGGC ACTGCCTACC ACCTTTATCA TGCTGATCGT GCAAGGGTCT
TTCGGTTTAC TGAACCGTAT CTCACCCACG TTAAACCTGT TTTCACTGGG TTTCCCTATC
GGCATGTTGT TTGGTCTGCT GTGTCTGCTG CTGTTAGCGA TCAATATCCC TGATCATTAT
CTTCATCTGA CCAATGAGAT CCTGACACAG TTTGAACGGA TGAAGGTGCA CTGA
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| Protein sequence | MGIDIHAMTA PLFALWLPFV RILSFLHFCP VIRHKAFTRK AKIGTALLLA ILITPMISQP
VVSRELLSIE SLLLAGEQIL WGWLFGSMLH LVLAALEAAG QILSMNMGLG MAMMNDPTSG
ASTAVISQII FTFSVLIFFT LDGHLLFVTI VLKSFSSWPI GEAINDFSLR SLALSLGWII
SSATLLALPT TFIMLIVQGS FGLLNRISPT LNLFSLGFPI GMLFGLLCLL LLAINIPDHY
LHLTNEILTQ FERMKVH
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