Gene YpsIP31758_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0554 
SymboldnaG 
ID5384535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp651570 
End bp653318 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content48% 
IMG OID640863526 
ProductDNA primase 
Protein accessionYP_001399547 
Protein GI153949220 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000322663 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGAC GAATTCCACG TGTATTTATC AATGACTTGC TAGCTCGCAC TGACATCATC 
GATCTTATCG ATGCTAGGGT AAAGCTGAAG AAGCAAGGCA AAAATTACCA TGCGTGCTGT
CCGTTCCATC ATGAGAAAAC ACCCTCATTC ACTGTTAACG GCGAAAAACA GTTTTATCAC
TGTTTTGGCT GCGGCGCTCA TGGCAATGCT GTTGATTTTT TGATGAATTA CGATCGACTC
GAGTTTGTCG AAAGTATCGA AGAATTAGCC ACCATGCACG GGCTGGAAGT GCCTTACGAG
GCAGGCAGCG GCACCACTCA GATCGAACGA CACCAACGAC AAAGTCTTTA TCAATTGATG
GAAAGCCTAA GCGCATTCTA TCAGCAGTCA CTCAAAGGCC AGAATGCCAA ACAGGCTCGT
GAATATCTTA AACATCGCGG TTTGAGTGAA GAAATCATCC AACATTTTGC TATCGGTTTT
GCGCCCCCTG GTTGGGACAA TGCCTTAAAA CGTTTTGGTC GTGATGGCGA GAGCCGTACA
GCACTGAACG ATGCCGGGAT GCTGGTAACT AATGATACCG GGCGGACTTA CGATCGTTTT
CGTGAGCGCG TCATGTTCCC TATTCGCGAT AAACGCGGGC GGGTCATCGC TTTTGGCGGG
CGAATTCTGG GTGATGGAGT GCCGAAGTAC CTCAACTCCC CAGAAACAGA AATTTTTCAT
AAAGGCCGCC AGTTATATGG CTTGTATGAA GCACAAGTCA ATCATCCAAA CCCAACCCGC
CTACTCGTTG TGGAAGGGTA TATGGATGTG GTGGCACTCG CACAATTTGG TATTGATTAT
GCTGTTGCCT CATTGGGAAC AGCGACAACC GCTGAGCATA TTCAGCTGTT ATTCCGCGCC
ACCGATAACG TAATTTGTTG TTATGACGGT GATCGCGCTG GTAGAGATGC CGCCTGGCGA
GCATTAGAAA CGGCACTGCC CTATCTAAAT GACGGACGTC AGCTACGCTT TATGTTTTTG
CCCGATGGCG AAGACCCTGA CACCTTGGTT CGTAAAGAAG GGAAAGACGC ATTTGAACAA
CGGATGGAGG CGGCACAGCC ACTCTCAACC TTCTTGTTTG AAACGTTAAT GCCACAGGTA
GATTTGAGCA GCCCTGATGG GCGCGCCAAA CTGAGCACAC TGGCATTACC TTTAATCAGC
CAGGTACCTG GTGAAGCGCT GCGCCTGTAC CTACGTCAGC AATTAGGGAA TAAGTTAGGT
CTGCTTGATG ACAGCCAGCT CGATAAGCTG ATGCCAAAAC AGATTGATAA TGCAAATACC
TACCAGCCGC CCCAGCTAAA ACGCACAACC ATGCGTATAC TTATAGGGCT ATTGGTACAA
AACCCACAAT TGGCTACACT TATTCCCTCA TTACAGGGGC TCGAACAAGC CAAATTGGCG
GGTTTACCGT TATTTATTGA GTTGGTTGAA ACCTGTCTGG CCCAACCGGG GCTGACAACC
GGGCAGTTGC TGGAACTGTA CCGTGATAAT AAATTCAGCC AACAACTTGA AACTCTTGCA
ACATGGAACC ACATGATTGT AGAGGATATG GTCGAACCGA CTTTTGTCGA CACGCTAGCG
AGCCTGTATG ACTCCATTTT GGAGCAACGT CAGGAAACGC TAATAGCGCG GGACCGTACA
CATGGATTAA ACGCCGAAGA ACGTAAAGAG CTTTGGTCTT TGAATCTGGC ACTAGCCAGA
AAAAAATGA
 
Protein sequence
MAGRIPRVFI NDLLARTDII DLIDARVKLK KQGKNYHACC PFHHEKTPSF TVNGEKQFYH 
CFGCGAHGNA VDFLMNYDRL EFVESIEELA TMHGLEVPYE AGSGTTQIER HQRQSLYQLM
ESLSAFYQQS LKGQNAKQAR EYLKHRGLSE EIIQHFAIGF APPGWDNALK RFGRDGESRT
ALNDAGMLVT NDTGRTYDRF RERVMFPIRD KRGRVIAFGG RILGDGVPKY LNSPETEIFH
KGRQLYGLYE AQVNHPNPTR LLVVEGYMDV VALAQFGIDY AVASLGTATT AEHIQLLFRA
TDNVICCYDG DRAGRDAAWR ALETALPYLN DGRQLRFMFL PDGEDPDTLV RKEGKDAFEQ
RMEAAQPLST FLFETLMPQV DLSSPDGRAK LSTLALPLIS QVPGEALRLY LRQQLGNKLG
LLDDSQLDKL MPKQIDNANT YQPPQLKRTT MRILIGLLVQ NPQLATLIPS LQGLEQAKLA
GLPLFIELVE TCLAQPGLTT GQLLELYRDN KFSQQLETLA TWNHMIVEDM VEPTFVDTLA
SLYDSILEQR QETLIARDRT HGLNAEERKE LWSLNLALAR KK