Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0547 |
Symbol | |
ID | 5385915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 643923 |
End bp | 644879 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640863518 |
Product | LysR family substrate binding transcriptional regulator |
Protein accession | YP_001399540 |
Protein GI | 153947540 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGT TTTCCGCGAT GACCACTTTT GCCAAAGTGG TGGAGACTGG CAGCTTCACC CGAGCGGCAG ATGTGTTAGC GCTGCCCAAG GCGCGGGTAT CACAGCGAGT TTCCGATCTT GAGCGTCATC TGGGTGTACG GTTGCTCAAT CGCACGACGC GTAGCTTGAA TTTGACCGAG GATGGACAGG CCTATTTCGC CAAGTGTCAG GTCATCCTTC AGGAAATCGA CGAATTGGAA GGGGCGCTCA AGGGGGGCTC GGTAGAACCT CGCGGAAAGT TGCGGGTCGA AGCGCTTGTG TCTGTTGCCC GCTGGGTGAT CGCTCCGAGC CTGCATGAGT TTCAAGCCCG TTACCCCAAT ATCTCAGTGC GTTTGGGGGG AAGTGATCGT ATCAGCCATC TGCTGGATAA TGGAATCGAC TGTGCCATCC GAGGTGGTCA TCTGGAAGAC TCCAGCCAGA TCGCGCGCCA CGTCTGTGAC GTACATTTGG GGCTTTATGC CGCCCCGGCT TACCTCGAAG CTGCTGGTGC GGTGACCCAT CCGCAGGAAC TAAGCGTTCA TCGCCGAATC TCGTGGTTTA CCGGTCAACG CAATCCTTTT ATTTGGTCGC TGCAGTCAGC GTCTGACGCT TTCGAGTTGC CTGCGGAGGA GGGGTTGCTG TTCGATGATC CGGATGTTGC ACTCGCTTCG TGCATGGCTG GAAGCGGAAT CTGCCCAGGA GCCCCTTTCG CTGTGGAAAG CTGGGTACGC GCTGGAGCGT TGGTGCCGGT ATTACCGCAT TGGCGCTTCA AGGCCCGCCC AATCCATATT ATTTATCCGA GCAATAGGCA CCTTTCCGCA CGGGTACGCT GTTTTGTGGA TTGGTCGCTT GAGATGATGC AAGCAAATAC GAGTATGCGA ATAACACCTT GGGAACTGGC TGAACGCATT TTAAAAGGCG ACATTTTCAG CCGTTAG
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Protein sequence | MDKFSAMTTF AKVVETGSFT RAADVLALPK ARVSQRVSDL ERHLGVRLLN RTTRSLNLTE DGQAYFAKCQ VILQEIDELE GALKGGSVEP RGKLRVEALV SVARWVIAPS LHEFQARYPN ISVRLGGSDR ISHLLDNGID CAIRGGHLED SSQIARHVCD VHLGLYAAPA YLEAAGAVTH PQELSVHRRI SWFTGQRNPF IWSLQSASDA FELPAEEGLL FDDPDVALAS CMAGSGICPG APFAVESWVR AGALVPVLPH WRFKARPIHI IYPSNRHLSA RVRCFVDWSL EMMQANTSMR ITPWELAERI LKGDIFSR
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