| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0499 |
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| Symbol | |
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| ID | 5386714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 575710 |
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| End bp | 578724 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640863470 |
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| Product | putative autotransporter protein |
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| Protein accession | YP_001399492 |
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| Protein GI | 153948648 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATT CAAATAGATC ACCCAAAAAC ATATCAAGAA ATTTTAAACA TCATAAAGAA
ACCTCTCTTT CAAGTAAAAA TAAAAGTCCT ATCGCAACAT GTGTCGCGGC GGCTCTCTTT
ATATTTGGCA GTTCATCAGT TATCGCGAAC CCGGACCATG AAGGTATCGT TGTGGGGAAA
TCAATCCTCA ATAAAAAGCA GAGTGCGGTA AATGCCATAA TAAATGAGGG TAACAGTTTA
GTACTCACTG ACAGTGCCAG CGCAGAGCAT ACGGCCGTTA ATACTGGCAG TATTTTTACG
TTAAAAGAGG ATAGTACAGC CGATATAACC TCGGTGACGG GGGGCTTTTT TAGTTTATCT
GGTAGCAGTA AAGCCAATAT AAATACGGTT CTTTCTGGAG GGTGGCTAGA GGTCAATGAC
GATGCAAGCA TCACCGAGAC AACGATCAGC TCAGATATCG AAAAAAAAAG TACTGTGCGC
TTATACCAAG ATGGAAGTGC CACAAAAACC ACTGTCGGTG ATAATGGTAT TCTCTATGTT
TCAGGTGATA GCCGTGCAGA AGAGACTCAT GTAACCAAAG GAGGAAAATT GATTGTTTAC
AGTGAGTCTC AGGGCCCGAC ACTGAAAAAC ACTCAAATCG CGGGAACATT AACCTTAAAA
AGTGATGTCA CACTGGAAGG TAAAACGGAA TTTGTCTCTA GCGCAACCAT AAAAACAACC
GGTCATTTAA TTGATAACCA GGGTCAACTT ATTTTCAATA GTGATAAAGA TATCGTTATT
GAAGCCATGA TCGATGGCCA AGGTTCATTA ACCAAAGAAA ATCCATTAAC CACATTAACG
CTATCTAGCG CGGGTGACGC TTGGGTTGCC AGTTATGTCT ATTCCGGTGA AACACATATC
AATGCAGGCA ATCTAAAACT CGCCAACACC CATTTTTTTG GTAGCCCGAT TAGTGGCAAT
CCAAATACAC GCCTTATTTT AGAAAAAAGC ACACTCGACA CCACCGTACA GGGCAGTAGT
GTATTTATCG ATAAACATAG CATATGGAAT ATGCAGGGTG ATTCTAACAT CCATCATTTA
GATATATTGG ATTCAGGGAG ACATGATTTA AATAACCCTG GAAAAACGGG CAATCAATTA
ATCATTAATG GCGATTACTT CAGTGATAAC GGCACGTTGA TTTTTCATAG TCAGTTAGCG
GGAGATGACT CCGTCACTGA CCACATACTG ATTAAAGGCA ATACGGGGGG CCATACCAAC
GTCCGAGTCA TTAATGTTAA CGGTGAAGGG AATAAAACAG ATTCAGGTAT CCAATTGATC
GAGGTGAGAG GGATATCGGA TGGGGAGTTT AGCCAGGTTG GCCGTATTAC CGCAGGGGCT
TATGAATACC GTTTAGGCCG TGGTAAGGAC GAACTCAGCA AAAACTGGTA TTTGAGCAGT
GATATTACGG ATTACTCTTC AGACGGTGTT CCCGAAGCAG AACTTCCAGG GATTTTGGTT
CTAAAATCAG ATAATGCCGC AGTCTTTTCA GCTAAATTAG CTGATTACGC GTTGCAAGCC
GTTGGCGGCG TGGTCGATTC CTTCACTCAA CCCGAGACTT CCCCCCCAAG TAACACCCCC
GAATTAACCG TTCCAGACCC AAAGCGCGCC AATGCCGCAG CCTTTTCAGC CAAATTAGCT
GATTACGCGT TGCAAACCGT TGGCGGCGTG GTCGATTCCT TCACTCAACC TGAGACTTCC
CCCCCAAGTA ACACCCCCGA ATTAACCGTT CCAGACCCAA AGCGCGCCAA TGCCGAAGCC
TTTTCAGCCA AATTAGCTGA TTACGCGTTG CAAGCTGTTG GCGGCGTGGT CGACACTTTC
ACCTCACCTG AGCAAACTAC TGCAACCCCA GACAGCACAC CTAAACCAAC CGATTTAGCA
GTGAATCCAG CAAGCACCCC CAAATCAACC GATTCAGCGG TGAAACCAGC AAGCACACCT
AAACCAACCG ATTTAGCAGT GAAACCCGTA AACACCGTGA TCAGCAGTGC CAAAACAGCC
GCACCCAAAC GCCAGACTTT AGTTCATACC CCCGAAAACG GGAGCTACAT TGCCAATATT
GCAATGGCAA GAAACCTGTT TACCACTCGT TTAGAAGATC GCACCGGCCA TTATCTCTAT
AAAGATATCG TTACTGGGCA ATGGCAGCCT ACCAGCATGT GGATGCATAC CCAAGGCGGC
AGAAGCCAGT TTGGTCATAC TGTTGAGCAA TTGAATATCA AAGGGAACTA CTACTCTGTT
CAACTTGGTG GGGATATTGC TCAATGGGCA ACCAATGAGC AAGACAGTGG GCGAATTGGC
GTGCTGGCAG GGTTAGGCAA AGCCACTAAC CACAGCCACT CTAAGGTGAC GAGCTATCAT
TCACGCGGTT CCGTTGATGG TTACAACCTT GGCATATACG CAACTTGGTT CGCCGATCAG
CAACATAATA CCGGCGTCTA TATTGACACT CTGGCGCAGT ATAGCTGGTT TAATAACGCC
GTTAATGGGC AAGATAAAGC AGAAGAAAAG TATAAATCAT CAGGTTTCAC TACCTCTATC
GAGAGCGGCT ATACCTTTAA TTTAGCGAAT AGCGATCAAC TGAGCTATTT CATCCAACCC
AACGCACAAA TTACTTGGGC AGGCATCAAC GCACAAACAC ATAAAACAGC TGACGGAGCG
GTGGTCAGTT ACCGCAATAA CGGGCATTTC ATCACTCGTA TCGGGGCTAA AGCGTATCTG
CAAACGCATG ATTCCCTGAA TACAAAATTC ACCCCTTTTG TTGCCGTAAA CTGGATTCAC
CAAAATCAAA ATACCGGCAC CATAATTTCA GGCCAAGGGA TTGATAATAA GATCCAAAAC
AGCACTGAAT TCAACGTCGG CGTTGAAAGC CAAATTGACC AACAACTGCA TATTTGGGCG
AATATAAATC ATCAAATGGG GCGTTATAAT TATACCGATA CCAACGCACT GGTTGGCGTG
AAATATCACT TCTAA
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| Protein sequence | MKNSNRSPKN ISRNFKHHKE TSLSSKNKSP IATCVAAALF IFGSSSVIAN PDHEGIVVGK
SILNKKQSAV NAIINEGNSL VLTDSASAEH TAVNTGSIFT LKEDSTADIT SVTGGFFSLS
GSSKANINTV LSGGWLEVND DASITETTIS SDIEKKSTVR LYQDGSATKT TVGDNGILYV
SGDSRAEETH VTKGGKLIVY SESQGPTLKN TQIAGTLTLK SDVTLEGKTE FVSSATIKTT
GHLIDNQGQL IFNSDKDIVI EAMIDGQGSL TKENPLTTLT LSSAGDAWVA SYVYSGETHI
NAGNLKLANT HFFGSPISGN PNTRLILEKS TLDTTVQGSS VFIDKHSIWN MQGDSNIHHL
DILDSGRHDL NNPGKTGNQL IINGDYFSDN GTLIFHSQLA GDDSVTDHIL IKGNTGGHTN
VRVINVNGEG NKTDSGIQLI EVRGISDGEF SQVGRITAGA YEYRLGRGKD ELSKNWYLSS
DITDYSSDGV PEAELPGILV LKSDNAAVFS AKLADYALQA VGGVVDSFTQ PETSPPSNTP
ELTVPDPKRA NAAAFSAKLA DYALQTVGGV VDSFTQPETS PPSNTPELTV PDPKRANAEA
FSAKLADYAL QAVGGVVDTF TSPEQTTATP DSTPKPTDLA VNPASTPKST DSAVKPASTP
KPTDLAVKPV NTVISSAKTA APKRQTLVHT PENGSYIANI AMARNLFTTR LEDRTGHYLY
KDIVTGQWQP TSMWMHTQGG RSQFGHTVEQ LNIKGNYYSV QLGGDIAQWA TNEQDSGRIG
VLAGLGKATN HSHSKVTSYH SRGSVDGYNL GIYATWFADQ QHNTGVYIDT LAQYSWFNNA
VNGQDKAEEK YKSSGFTTSI ESGYTFNLAN SDQLSYFIQP NAQITWAGIN AQTHKTADGA
VVSYRNNGHF ITRIGAKAYL QTHDSLNTKF TPFVAVNWIH QNQNTGTIIS GQGIDNKIQN
STEFNVGVES QIDQQLHIWA NINHQMGRYN YTDTNALVGV KYHF
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