Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0451 |
Symbol | ttg2D |
ID | 5388115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 526197 |
End bp | 526820 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863420 |
Product | toluene tolerance protein Ttg2D |
Protein accession | YP_001399444 |
Protein GI | 153949643 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.098573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC GTCTATTCAT GGTCGCATTG TTGGCCATAG CACCACTGGT TCATGCTGTC GATCAAAGCA ACCCTTATCG TCTGATGGAT GAGGCAGCGA AGAAAACCTT TACGCGTCTG AAAAATGAGC AGCCTAAGAT TAAGCAAAAT CCAGATTATC TCCGCACCAT TGTACGCGAA GAGCTGTTGC CGTTTGTTCA GATCAAATAC GCCGGCGCGT TAGTACTGGG TAGCTATTAT AAAGATGCTA CACCTGCACA GCGTGAAGCG TATTTCAATG CATTCGGTAA ATATCTGGAG CAGGCATACG GGCAGGCATT GGCGCTGTAT CACGGCCAAA CTTACGATGT GGCACCAGAC CAGCCTTTAG GGGATGCCAA CATCGTTGCT ATCCGCGTCA CCATTCTCGA TCCAAGTGGG CGTCCACCTG TCCGGTTAGA TTTCCAATGG CGTAAAAATA GCCAAACCGG TAACTGGCAG GCTTATGACA TGATCGCCGA AGGGGTGAGC ATGATTAGCA CCAAACAGAA TGAATGGGCC TCTATCCTGC GCCAAAAGGG TGTGGATGGT TTGACCCAAC AATTGCTGAG TGCGGCTAAA CAGCCAATCA CCTTAGATAA ATAG
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Protein sequence | MFKRLFMVAL LAIAPLVHAV DQSNPYRLMD EAAKKTFTRL KNEQPKIKQN PDYLRTIVRE ELLPFVQIKY AGALVLGSYY KDATPAQREA YFNAFGKYLE QAYGQALALY HGQTYDVAPD QPLGDANIVA IRVTILDPSG RPPVRLDFQW RKNSQTGNWQ AYDMIAEGVS MISTKQNEWA SILRQKGVDG LTQQLLSAAK QPITLDK
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