| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0446 |
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| Symbol | kdsD |
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| ID | 5385536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 521468 |
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| End bp | 522454 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640863415 |
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| Product | D-arabinose 5-phosphate isomerase |
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| Protein accession | YP_001399439 |
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| Protein GI | 153948490 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACTT TTGATTTACA GCCGGGCGTG GATTTCCAGC AGGCAGGTAA GCAGGTACTT
CAGATTGAAC GCGAAGGGCT GGCTCAACTC GATCAATACA TAAACGAGGA TTTCTCCAGA
GCCTGTGAGG CCATTTTTCG TTGCCACGGC AAAGTCGTCG TGATGGGAAT GGGCAAATCT
GGTCATATTG GCTGCAAAAT TGCAGCCACA TTCGCCAGCA CGGGCACACC TGCATTTTTT
GTCCATCCTG GTGAAGCCAG CCATGGCGAT TTGGGCATGA TCACGCCACA AGATATTGTA
TTAGCTATCT CTAACTCTGG GGAATCCAAC GAAATCCTCA CGTTGATCCC CGTGCTTAAG
CGCCAGAAAA TTCTGTTGAT TTGCATGAGC AGTAACCCTG AGAGCACCAT GGGTAAAGCG
GCCGATATTC ACTTGTGCAT TAATGTGCCA CAAGAGGCCT GTCCGCTGGG GCTAGCGCCA
ACCACCAGTA CGACTGCAAC ACTGGTTATG GGGGATGCGT TGGCGGTAGC CTTGCTCAAA
GCACGGGGTT TCACGCAGGA AGATTTCGCA CTCTCTCACC CAGGTGGCGC GCTGGGGCGT
AAGTTGCTGC TGCGGATCAG CGATATTATG CATACGGGTA CGGAGATCCC CACCGTCAGC
CCTGATGCAT CATTACGTGA TGCCTTGCTA GAAATTACTC GGAAAAGTCT GGGTTTGACC
GTTATTTGTG ACGATTCAAT GAGGATTAAA GGTATCTTTA CCGACGGTGA CTTGCGCCGG
GTATTTGATA TGGGCATTGA TCTGAATAAT GCAAAAATTG CTGACGTCAT GACTCGCGGG
GGTATTCGAG TCCCTCCGAA CATATTGGCG GTGGACGCGC TCAATCTGAT GGAGTCACGC
CATATCACTG CGTTGCTCGT CGCTGATGGT GACCAATTAC TGGGTGTCGT ACATATGCAC
GATATGCTGA GAGCCGGTGT TGTCTGA
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| Protein sequence | MSTFDLQPGV DFQQAGKQVL QIEREGLAQL DQYINEDFSR ACEAIFRCHG KVVVMGMGKS
GHIGCKIAAT FASTGTPAFF VHPGEASHGD LGMITPQDIV LAISNSGESN EILTLIPVLK
RQKILLICMS SNPESTMGKA ADIHLCINVP QEACPLGLAP TTSTTATLVM GDALAVALLK
ARGFTQEDFA LSHPGGALGR KLLLRISDIM HTGTEIPTVS PDASLRDALL EITRKSLGLT
VICDDSMRIK GIFTDGDLRR VFDMGIDLNN AKIADVMTRG GIRVPPNILA VDALNLMESR
HITALLVADG DQLLGVVHMH DMLRAGVV
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