| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0406 |
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| Symbol | |
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| ID | 5388276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 470313 |
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| End bp | 473102 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640863375 |
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| Product | putative insecticidal toxin complex protein |
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| Protein accession | YP_001399399 |
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| Protein GI | 153950752 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCCAA GTTTACTAAC CCAGCTTTGC ACCAACACCC CCAGTATTGC CGTTCACGAT
AACCGGGGGT TAGCCATTCG CACACTGGCT TATAACCGCC GCAGTCATAA TGAAACCGTT
GACGAACTGA GCAGCCGCAA CCGCTATAAC GCCTCCGGTC AGTTAATCGC CAGCCGCGAC
CCGCGCCTTG AGGTGGATAA TTTCCGCTAT CAATACAGCC TCAGCGGTGT TCCACTGCGT
ACCGACAGCG TCGATAGCGG CAGTACGCTG CAACTGGCAG ATAGTGCTGG CCGCACGGTG
CTCACGCGGG ATGCACACCA CACCCGCCGC TGGGTAGAGT ATGAGACCGG TGAGCACAGT
TTAGATCGCC CACTAAGTTA CCGCGAGCAA GCCAAAGGCG GCCTGAAAAC GGTTACCGAC
CGCTTTTTCT ATGGCGAAAA TAGCGAGCAG GATAAAAGCT GTAATCTCAA TGGTCAGTGT
GTCCGCCATT ACGACAGCGC CGGTTTACAG GCACTGATTA GCCAGTCAAT TATTGATGTG
CCGCTGCAAC AGCAGCGCCG TCTACTGACG GAGACTAAAG GCCCGGTTGA CTGGTTTGGC
GAGCAGGAGA ACTGGGGCGC TCGCCTGAGT GAATCGCCGT TTGTTAGCCA TTGCACCACC
AATGCTCTCG GCCAGTTAAT CACGCAAACC GATGCCAAAG GCCATATCCA GCGCATGGCC
TATAACCGTG CCGGACAGCT TATCGGTTCG TGGTTAACGG TAAAAAATGG CATGGAGCAG
CCCATTGTAT ACTCACTCAC CTATTCGGCT GCTGGGCAAA AACTGCGCGA AGAGAGCGGC
AACGGGGTCA TTACCGAATA CCGTTATGAG CCGCAAACCC AGCGTTTAAT CGGCATTAAA
ACCACCCGTC CGGCGAAGAA AGACCGCCCG ACCCGGTTAC AAGACCTGCG TTACGATTAT
GACCCGGTCG GGAATATTCT CGCCATCCAT AACGACGCCG AAGCCACCCG CTTCTACCGT
AATCAGAAAA TCGTGCCGGA AACCACTTAC CGCTACGATG CACTGTATCA GCTTATTGAG
GCCACTGGCC GTGAAGCCGA TACCAACGGC ATACAAAACA GCCAGTTGCC CACGCTGGCG
TCACTGAACG ACAGCAACCA GTTCGTCAAT TACACCCGCC ACTACCACTA TGACCGCGCC
GGTAACCTGC TAAAAATTCA GCACACAGGA GCCAGCCAAT ACAGTACCTA TATCACGGTG
TCCGATTCGT CCAATCATGG CATTCAGCAA CAAGATGGCA TCACCGCCCA TGATGTCCGC
TCCCAGTTTG ATGCGGCGGG TAATCAGCGA CAACTGCAAC CCGGTCAACT CCTTCACTGG
AACAGCCGCA ATCAGTTACA GCAAGTGGAG CCCGTGCCCC GCAACGACGG CATCAGTGAC
AGCGAAAACT ATCTCTATGA TGGCAGCGGT AGGCGGGTGG TCAAAATCAG TCTCCATAAA
ACCCATAACG CCATCCAAAC CCGTTCAGTC ATTTATTTAG CGGGACTGGA ACTGCGTAGC
CAATATAATG GCAATAATCT GACAGAAGAT TTTCAGGTGA TGACCGTGGG TGCCGCGGGC
CGTGCTCAGG TACGGGTATT ACACTGGGAG CGCGGCCAAC CCGCTGATAT CGTCAATGAC
CAACTGCGTT ACAGTTTCGA TAACCACATT GGCTCGGCAT TAATCGAATT AGACAGCGAC
GGCGATATTA TCAGCCAGGA AGAATATTAC CCATTTGGCG GCACCGCGGT GTTAGCCTCC
CGTAATACCG TGGAAGCTAA ATATAAAACC GTTCGTTACT CCGGTAAAGA GCGTGACACC
ACCGGATTGT ATTATTACGG TTACCGTTAT TACCAGCCGT GGCTGGGCCG CTGGTTAAGC
GCTGACCCCG CAGGCACTAT AGACGGACTG AATTTATACC GAATGGTGAG GAATAACCCA
GTGGGGTTGA TGGATGGGGA TGGGTTAATG ACCGATGAAC AATTAAAGGA AAATATAAAT
ATGCTAAAAA AAATAGGGTT ATCAACAATA GAAGATTTAA AGCAAACACT CTCAATGTTT
AATTACAGCA AGGAAGATAA TGAGAAGCTA TTTTATTTGA TGCAAGAGCA AATATTGAAT
CAAAGCGTTT CAATTTCAGA TGATGAGATT ATATTTACAG AAGAAAATAG AATGTCTGAT
TCTGAATATT CTGATGATGA TGATGATGAT GACACGTTAG AAAATGAAGT GGAAATAAGT
ATGGAAAATT ATCGAAAAGT GAGTCATAAA CTGGCACTAA GTACGACAGG AATGGGGGAC
TGCACATCGA TTGCAATATT TTCTTCAACT GAAAAAAGCC TAATGCATAT CAGTGGATCA
AATTTGGAAA CACCAATGAA AATATATAAG GAACGTGAAA AACTTGCTTA TTCACACTCG
ACTGCCGGAT CCGTTGTTGT TGATTTAACC GAAAAAATTG AAAATTACAA CAATAAGAAA
ATAGCAATTA TATTTGGAAT TAACAATGGT TCCATGGGCT TCGAGATTTT TTTAGACCAA
TATTACAAAG GAAGTAAACC ACTACTTGAC CTGCTCTATA ATTTTAAAAA AGAAAACATT
AGTTTTTATA AAAATATAAA GGTTGGAATA AGTCAAGAGG GAGAAATATT TAGTGATTTA
AATACAAGAA CGCGACTTAA ATCCATTTCT ATTAACGATA GAGAAGAGCT ACTTTCAATG
ATATTTAATC GAGAGTATAG CGATTGTTAA
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| Protein sequence | MSPSLLTQLC TNTPSIAVHD NRGLAIRTLA YNRRSHNETV DELSSRNRYN ASGQLIASRD
PRLEVDNFRY QYSLSGVPLR TDSVDSGSTL QLADSAGRTV LTRDAHHTRR WVEYETGEHS
LDRPLSYREQ AKGGLKTVTD RFFYGENSEQ DKSCNLNGQC VRHYDSAGLQ ALISQSIIDV
PLQQQRRLLT ETKGPVDWFG EQENWGARLS ESPFVSHCTT NALGQLITQT DAKGHIQRMA
YNRAGQLIGS WLTVKNGMEQ PIVYSLTYSA AGQKLREESG NGVITEYRYE PQTQRLIGIK
TTRPAKKDRP TRLQDLRYDY DPVGNILAIH NDAEATRFYR NQKIVPETTY RYDALYQLIE
ATGREADTNG IQNSQLPTLA SLNDSNQFVN YTRHYHYDRA GNLLKIQHTG ASQYSTYITV
SDSSNHGIQQ QDGITAHDVR SQFDAAGNQR QLQPGQLLHW NSRNQLQQVE PVPRNDGISD
SENYLYDGSG RRVVKISLHK THNAIQTRSV IYLAGLELRS QYNGNNLTED FQVMTVGAAG
RAQVRVLHWE RGQPADIVND QLRYSFDNHI GSALIELDSD GDIISQEEYY PFGGTAVLAS
RNTVEAKYKT VRYSGKERDT TGLYYYGYRY YQPWLGRWLS ADPAGTIDGL NLYRMVRNNP
VGLMDGDGLM TDEQLKENIN MLKKIGLSTI EDLKQTLSMF NYSKEDNEKL FYLMQEQILN
QSVSISDDEI IFTEENRMSD SEYSDDDDDD DTLENEVEIS MENYRKVSHK LALSTTGMGD
CTSIAIFSST EKSLMHISGS NLETPMKIYK EREKLAYSHS TAGSVVVDLT EKIENYNNKK
IAIIFGINNG SMGFEIFLDQ YYKGSKPLLD LLYNFKKENI SFYKNIKVGI SQEGEIFSDL
NTRTRLKSIS INDREELLSM IFNREYSDC
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