Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0324 |
Symbol | |
ID | 5386138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 375816 |
End bp | 376502 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640863294 |
Product | hypothetical protein |
Protein accession | YP_001399318 |
Protein GI | 153948416 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03360] type VI secretion-associated protein, VC_A0118 family |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACGT GGTTATTGAT TAGCTCGTTA CTGTTTTCCG GCGGTCATAC CGACGCTTTT TGGACGATGG GATTACCCCC CCCGGTGGCG GAAAAAGAGG AGGCGGGGAC GCTGGCACTG GTGATGCGTT GCCGTAGCGA AAACTCGGCT CTGGTACGGC TGGACTGTTA TGACAAAGCG CTCTCGCCAG TGAACGCCGT CGATGAAAAA CGGGTAAATG CTGGCCCTGC CTGGCAGCGA GCGATGAATC AGGAAAAGGG ACGCACTGAT CACTCCACCG CATTTCTGGT GACGGAAGGC GAAGGCTCGA ATCCGATGGT GCTCATTACC ACCCCTGCGA TTGGCATGCC ACCTCCACGG CCGGTACTGA TGTTGAGCTG CATTGACAAT ATCACCCGCT TACAGATTGC GCTGGTGGGG CCACAAAAAG AGAGTTCCGT TACGTTGATT ATCGACAAAG CCGGAATTAT CGACAAAACC CGTCTGGACG CACAGTGGTT CCTGCGTGAA AACGGCTATT TACTGGAATC CAGCCGTGGC CTGGCGGGTA TCGATGAAAT TAAGCGGTTG ATGTCAGCGG AAACCCTGAC CATCGAAGGG GCAAACGGTG CTTTTCCTCG GCTGACATTT ACTCTTTCTC AGTTAACGCC AGCGTTGAAA CCGCTGCGTA ACGCATGTCA TTGGTGA
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Protein sequence | MNTWLLISSL LFSGGHTDAF WTMGLPPPVA EKEEAGTLAL VMRCRSENSA LVRLDCYDKA LSPVNAVDEK RVNAGPAWQR AMNQEKGRTD HSTAFLVTEG EGSNPMVLIT TPAIGMPPPR PVLMLSCIDN ITRLQIALVG PQKESSVTLI IDKAGIIDKT RLDAQWFLRE NGYLLESSRG LAGIDEIKRL MSAETLTIEG ANGAFPRLTF TLSQLTPALK PLRNACHW
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