Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0285 |
Symbol | |
ID | 5386469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 319660 |
End bp | 320271 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640863251 |
Product | hypothetical protein |
Protein accession | YP_001399282 |
Protein GI | 153948173 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000001725 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCTT ATCTGATACC CGCTATGCCG GTTACTATCA GCGAAGAGAT CAAGAAAAGC CGTTTCATTA CCTTATTGGC TCATACCTGT GGGGTTAATG AGGCTAAAGA TTTTATTCAG CAGGTTAAGC AACAACATCC AACGGCCCGG CATCATTGCT GGGCTTTTGT TGCCGGTCCC CCGACGGATT CTCAGCAGTT AGGTTTTTCC GATGATGGAG AACCCTCTGG CACCGCCGGT AAACCCATCT TGGCACAACT GATGGGGAGT GATATTGGAG AAATTACGGC TGTTGTTGTG CGTTATTATG GGGGCATTAA ACTTGGCACA GGTGGGTTAG TAAAAGCTTA TGGTAGTGGT GTGCAGCAGG CACTAAAACA GGTAGCGGTA AAATATAAAG TCCCACAGGT GGAATATACT TTACAGTGTG ACTATGCGCA GCTTGCTATG GTAGAAATGC TATTACAGCA GGTTGAAGGC CAGATTTTAC GAGGTGAATA CACGGAACTT GTAACACTTC ATCTCACTCT GCCAGCAACT CAAGCCAGCC AAGTCGGGGA TAAATTGCGT GATCTCAGTC GTGGTACATT GCAATTAACA CCTATTTCGT AA
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Protein sequence | MQPYLIPAMP VTISEEIKKS RFITLLAHTC GVNEAKDFIQ QVKQQHPTAR HHCWAFVAGP PTDSQQLGFS DDGEPSGTAG KPILAQLMGS DIGEITAVVV RYYGGIKLGT GGLVKAYGSG VQQALKQVAV KYKVPQVEYT LQCDYAQLAM VEMLLQQVEG QILRGEYTEL VTLHLTLPAT QASQVGDKLR DLSRGTLQLT PIS
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