Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0283 |
Symbol | fadB |
ID | 5385498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 315813 |
End bp | 318002 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863249 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_001399280 |
Protein GI | 153947422 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00882549 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTACC AAAGCGAAAC ATTACAGCTT CACTGGTTGG AAAACGGTAT TGCCGAGTTG GTATTTGATG CTCCGGGTTC AGTTAATAAA CTGGATACTA AAACCGTAGC CAATTTGGGT GAAGCCTTGA ATGTGTTAGA AAAACAAAGT GAACTCAAAG GGTTGCTATT ACGTTCAGCG AAGACAGCCT TGATTGTTGG TGCCGATATT ACTGAGTTTC TATCCCTGTT TAATGCCCCA CCAGAAAAAC TGCACCAGTG GCTGGTGTTC GCCAACACCA TTTTCAATCG ACTGGAAGAT TTACCCGTGC CAACCATTTC AGCAATTAAT GGATACGCAC TAGGTGGAGG ATGTGAATGT ATTTTGGCGA CGGATTTCCG TATCGCCTCC CCAGAAGCAC GTATCGGCCT CCCAGAAACC AAGTTGGGCA TCATGCCGGG CTTCGGTGGT TCGGTCCGTT TACCACGCCT GCTAGGCGCT GATAGTGCAC TTGAGATTAT TGCCACAGGT AAAGATGTTA CTGCCAACGA TGCACTAAAG ATTGGGCTGG TTGATGCAGT TGTCGACCCT GAGAAACTGG TCGGTTCAGC CTTAACTATG CTGAAACAAG CTATTGACGG TAAGCTCGAT TGGCAGGCAG CACGCCGCCC AAAACTGGAA CCCCTAAAAC TTAATCCTAC CGAAGCGGCT ATGTGTTTTA CCATTGCTAA AGGCAGAGTC ATGCAAGTCG CCGGGAAACA CTATCCCGCA CCATTGACTG CAGTAAAAAC TATTGAAGCC GCCGCAAAAT TTGGTCGTAC CGAAGCGCTG AACTTGGAAA CCAACAGTTT TGTCCCTTTA GCGGGTTCCA ATGAAGCTCG CGCTTTGGTG GGGATTTTTC TTAACGACCA GTATGTAAAA GCGCAAGCCA AAAAACTGTC CAAAGGCGTC GCTGCACCAA AACTGGCTGC GGTTCTGGGC GCAGGGATCA TGGGAGGTGG AATTGCCTAT CAGTCAGCGC TGAAAAGTGT GCCAGTCATT ATGAAAGATA TTAATGAAAA CTCGCTGGAT CTTGGAATGA ATGAGGCCGC TAAATTACTG AATAAACAGC TGGAACGCGG CAAAGTGGAT GGCCTTAAAA TGGCAAGTAT TCTAGCGACT ATTCGACCAA CCTTGGATTA TGCAGGTATT GAACGAGCCC AAGTGATCGT CGAAGCTGTG GTGGAGAACC CGAAGGTTAA AGCCGCTGTA CTTGCGGAAG TAGAAGCATT AATCGGTGAA GATACCGTTT TAGCTTCCAA TACCTCGACG ATTCCTATTG ATCAGTTGGC TAAATCACTC AAACGCCCTG AAAATTTCTG CGGTATGCAC TTCTTCAATC CAGTACACCG GATGCCACTG GTTGAAATTA TTCGTGGGGC AAAAACCTCA GATAAAACCC TTGCGGCAGT AGTCGCTTAC GCTACACAAA TGGGGAAAAC CCCAATTGTT GTCAATGATT GCCCTGGTTT CTTCGTTAAC CGCGTCTTAT TCCCGTATCT CGCAGGCTTT GGCATGTTAG TCAGAGACGG TGGGGATTTC CACCAAATTG ATAAAGTGAT GGAAAAACAG TTTGGCTGGC CGATGGGGCC CGCTTATCTA TTAGATGTCG TCGGTATTGA TACTGCCCAT CATGCACAAG CGGTGATGGC TGCCGGTTTC CCTGAGCGAA TGAACAAGGA TTACCGTGAT GCGGTTGATG TGATGTTTGA TAACCAACGA TTTGGGCAAA AGAATGGTCA GGGGTTTTAC CGCTATACGC AAGATGCAAA GGGTAAGCCA CGTAAAGAAA ATGACGAACA AGTGGATAAA TTACTGGCAG AAATCAGCCA ACCTCTCCAA GAATTCAGCG ATGAAGACAT TATTGCCCGC ACCATGATCC CAATGATCAA TGAAGTCGTC CGCTGCCTGG AAGAAGGTAT TATTGCCAGC GCAGCCGAGG GTGACATGGC GCTGGTTTAT GGCCTTGGCT TCCCTCCATT CCACGGAGGA GTCTTCCGTT ACCTTGATAC GCTCGGTAGC GCAAATTATG TCGAAATGGC TCAACGCTAT GCCCACCTTG GTGCGTTATA TCACGTTCCT GCGGGGCTAC GAGCTAAAGC TGAACATAAC GAAAGTTATT ATCCTGTGTC AGCAGCGCTG CTTGATGTTT CTACCAATCA ACCAGCATGA
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Protein sequence | MLYQSETLQL HWLENGIAEL VFDAPGSVNK LDTKTVANLG EALNVLEKQS ELKGLLLRSA KTALIVGADI TEFLSLFNAP PEKLHQWLVF ANTIFNRLED LPVPTISAIN GYALGGGCEC ILATDFRIAS PEARIGLPET KLGIMPGFGG SVRLPRLLGA DSALEIIATG KDVTANDALK IGLVDAVVDP EKLVGSALTM LKQAIDGKLD WQAARRPKLE PLKLNPTEAA MCFTIAKGRV MQVAGKHYPA PLTAVKTIEA AAKFGRTEAL NLETNSFVPL AGSNEARALV GIFLNDQYVK AQAKKLSKGV AAPKLAAVLG AGIMGGGIAY QSALKSVPVI MKDINENSLD LGMNEAAKLL NKQLERGKVD GLKMASILAT IRPTLDYAGI ERAQVIVEAV VENPKVKAAV LAEVEALIGE DTVLASNTST IPIDQLAKSL KRPENFCGMH FFNPVHRMPL VEIIRGAKTS DKTLAAVVAY ATQMGKTPIV VNDCPGFFVN RVLFPYLAGF GMLVRDGGDF HQIDKVMEKQ FGWPMGPAYL LDVVGIDTAH HAQAVMAAGF PERMNKDYRD AVDVMFDNQR FGQKNGQGFY RYTQDAKGKP RKENDEQVDK LLAEISQPLQ EFSDEDIIAR TMIPMINEVV RCLEEGIIAS AAEGDMALVY GLGFPPFHGG VFRYLDTLGS ANYVEMAQRY AHLGALYHVP AGLRAKAEHN ESYYPVSAAL LDVSTNQPA
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